Protein–RNA interactions for Protein: Q8K409

Polb, DNA polymerase beta, mousemouse

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PolbQ8K409 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PolbQ8K409 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PolbQ8K409 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
PolbQ8K409 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
PolbQ8K409 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
PolbQ8K409 Mrps10-202ENSMUST00000119841 1113 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PolbQ8K409 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.36□□□□□ -0.27
PolbQ8K409 Gm9002-201ENSMUST00000178437 499 ntBASIC13.36□□□□□ -0.27
PolbQ8K409 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PolbQ8K409 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.36□□□□□ -0.27
PolbQ8K409 Gm8463-201ENSMUST00000208573 613 ntBASIC13.36□□□□□ -0.27
PolbQ8K409 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PolbQ8K409 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PolbQ8K409 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PolbQ8K409 Gm5356-201ENSMUST00000093326 615 ntBASIC13.36□□□□□ -0.27
PolbQ8K409 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PolbQ8K409 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PolbQ8K409 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
PolbQ8K409 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PolbQ8K409 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PolbQ8K409 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PolbQ8K409 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC13.36□□□□□ -0.27
PolbQ8K409 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.36□□□□□ -0.27
PolbQ8K409 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PolbQ8K409 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PolbQ8K409 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
PolbQ8K409 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PolbQ8K409 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC13.36□□□□□ -0.27
PolbQ8K409 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
PolbQ8K409 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
PolbQ8K409 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PolbQ8K409 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
PolbQ8K409 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PolbQ8K409 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PolbQ8K409 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
PolbQ8K409 Gtf2ird1-201ENSMUST00000073161 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PolbQ8K409 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
PolbQ8K409 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
PolbQ8K409 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PolbQ8K409 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PolbQ8K409 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PolbQ8K409 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PolbQ8K409 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PolbQ8K409 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PolbQ8K409 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PolbQ8K409 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PolbQ8K409 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PolbQ8K409 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
PolbQ8K409 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PolbQ8K409 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PolbQ8K409 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PolbQ8K409 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PolbQ8K409 Gm27892-201ENSMUST00000185017 106 ntBASIC13.35□□□□□ -0.27
PolbQ8K409 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PolbQ8K409 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC13.35□□□□□ -0.27
PolbQ8K409 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PolbQ8K409 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
PolbQ8K409 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
PolbQ8K409 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PolbQ8K409 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PolbQ8K409 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PolbQ8K409 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
PolbQ8K409 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
PolbQ8K409 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
PolbQ8K409 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
PolbQ8K409 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PolbQ8K409 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PolbQ8K409 Gm12500-202ENSMUST00000186471 2428 ntBASIC13.34□□□□□ -0.27
PolbQ8K409 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
PolbQ8K409 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PolbQ8K409 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PolbQ8K409 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PolbQ8K409 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
PolbQ8K409 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PolbQ8K409 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PolbQ8K409 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PolbQ8K409 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.34□□□□□ -0.27
PolbQ8K409 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PolbQ8K409 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PolbQ8K409 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PolbQ8K409 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PolbQ8K409 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PolbQ8K409 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PolbQ8K409 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PolbQ8K409 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PolbQ8K409 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PolbQ8K409 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
PolbQ8K409 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC13.34□□□□□ -0.27
PolbQ8K409 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PolbQ8K409 Gm6244-201ENSMUST00000178732 841 ntBASIC13.34□□□□□ -0.27
PolbQ8K409 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC13.34□□□□□ -0.27
PolbQ8K409 Gm38671-201ENSMUST00000200573 130 ntBASIC13.34□□□□□ -0.27
PolbQ8K409 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PolbQ8K409 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PolbQ8K409 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PolbQ8K409 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PolbQ8K409 Tmem107-202ENSMUST00000094081 1263 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
PolbQ8K409 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
PolbQ8K409 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
PolbQ8K409 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms