Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cchcr1Q8K2I2 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Gm26464-201ENSMUST00000157094 305 ntBASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Gm5385-201ENSMUST00000118988 1559 ntBASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Cchcr1Q8K2I2 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cchcr1Q8K2I2 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cchcr1Q8K2I2 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
Cchcr1Q8K2I2 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cchcr1Q8K2I2 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cchcr1Q8K2I2 Jph2-201ENSMUST00000017961 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cchcr1Q8K2I2 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cchcr1Q8K2I2 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.77■□□□□ 0.12
Cchcr1Q8K2I2 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC15.77■□□□□ 0.12
Cchcr1Q8K2I2 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Cchcr1Q8K2I2 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.77■□□□□ 0.12
Cchcr1Q8K2I2 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC15.77■□□□□ 0.12
Cchcr1Q8K2I2 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Cchcr1Q8K2I2 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cchcr1Q8K2I2 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC15.77■□□□□ 0.12
Cchcr1Q8K2I2 AC132863.2-201ENSMUST00000226643 799 ntBASIC15.77■□□□□ 0.12
Cchcr1Q8K2I2 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Cchcr1Q8K2I2 Hist1h2al-201ENSMUST00000091708 339 ntBASIC15.77■□□□□ 0.12
Cchcr1Q8K2I2 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Cchcr1Q8K2I2 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cchcr1Q8K2I2 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cchcr1Q8K2I2 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cchcr1Q8K2I2 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cchcr1Q8K2I2 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cchcr1Q8K2I2 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC15.77■□□□□ 0.11
Cchcr1Q8K2I2 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cchcr1Q8K2I2 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cchcr1Q8K2I2 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cchcr1Q8K2I2 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Cchcr1Q8K2I2 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Cchcr1Q8K2I2 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Fbn1-201ENSMUST00000028633 9847 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC15.76■□□□□ 0.11
Cchcr1Q8K2I2 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms