Protein–RNA interactions for Protein: Q8K0V4

Cnot3, CCR4-NOT transcription complex subunit 3, mousemouse

Known RBP Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnot3Q8K0V4 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cnot3Q8K0V4 Rgma-201ENSMUST00000094312 3586 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cnot3Q8K0V4 Usp3-205ENSMUST00000127569 5607 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cnot3Q8K0V4 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cnot3Q8K0V4 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cnot3Q8K0V4 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cnot3Q8K0V4 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cnot3Q8K0V4 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cnot3Q8K0V4 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Cnot3Q8K0V4 Sorcs1-205ENSMUST00000209413 4398 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Cnot3Q8K0V4 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Ptpn7-203ENSMUST00000187985 1990 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Eif4enif1-202ENSMUST00000110048 3712 ntTSL 5 BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Gnb4-205ENSMUST00000155737 5997 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Gm15770-201ENSMUST00000117498 584 ntBASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Gm21470-201ENSMUST00000187680 696 ntBASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Qrfp-201ENSMUST00000057407 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 CT573086.2-201ENSMUST00000227277 4992 ntBASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Duox2-201ENSMUST00000053734 5744 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
Cnot3Q8K0V4 Ptprk-202ENSMUST00000218276 4754 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cnot3Q8K0V4 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cnot3Q8K0V4 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cnot3Q8K0V4 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cnot3Q8K0V4 Smim1-213ENSMUST00000182151 5091 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Cnot3Q8K0V4 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cnot3Q8K0V4 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Cnot3Q8K0V4 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cnot3Q8K0V4 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cnot3Q8K0V4 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cnot3Q8K0V4 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cnot3Q8K0V4 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC12.49□□□□□ -0.41
Cnot3Q8K0V4 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cnot3Q8K0V4 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.49□□□□□ -0.41
Cnot3Q8K0V4 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Cnot3Q8K0V4 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.49□□□□□ -0.41
Cnot3Q8K0V4 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.49□□□□□ -0.41
Cnot3Q8K0V4 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cnot3Q8K0V4 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.49□□□□□ -0.41
Cnot3Q8K0V4 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cnot3Q8K0V4 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cnot3Q8K0V4 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cnot3Q8K0V4 Pitpnm3-202ENSMUST00000108508 6450 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cnot3Q8K0V4 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cnot3Q8K0V4 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
Cnot3Q8K0V4 Nyap1-202ENSMUST00000118326 4565 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cnot3Q8K0V4 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cnot3Q8K0V4 Gm43463-201ENSMUST00000195967 1803 ntBASIC12.48□□□□□ -0.41
Cnot3Q8K0V4 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cnot3Q8K0V4 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Cnot3Q8K0V4 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Cnot3Q8K0V4 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cnot3Q8K0V4 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cnot3Q8K0V4 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cnot3Q8K0V4 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.48□□□□□ -0.41
Cnot3Q8K0V4 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cnot3Q8K0V4 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cnot3Q8K0V4 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cnot3Q8K0V4 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cnot3Q8K0V4 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cnot3Q8K0V4 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cnot3Q8K0V4 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cnot3Q8K0V4 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 67 ms