Protein–RNA interactions for Protein: Q8CI96

Clip4, CAP-Gly domain-containing linker protein 4, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip4Q8CI96 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clip4Q8CI96 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clip4Q8CI96 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Clip4Q8CI96 Gm15240-201ENSMUST00000118156 720 ntBASIC13.45□□□□□ -0.26
Clip4Q8CI96 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.45□□□□□ -0.26
Clip4Q8CI96 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Clip4Q8CI96 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.45□□□□□ -0.26
Clip4Q8CI96 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clip4Q8CI96 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.45□□□□□ -0.26
Clip4Q8CI96 AC149294.4-201ENSMUST00000227870 882 ntBASIC13.45□□□□□ -0.26
Clip4Q8CI96 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.45□□□□□ -0.26
Clip4Q8CI96 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clip4Q8CI96 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Clip4Q8CI96 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clip4Q8CI96 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clip4Q8CI96 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Clip4Q8CI96 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Clip4Q8CI96 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Clip4Q8CI96 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clip4Q8CI96 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clip4Q8CI96 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Clip4Q8CI96 Zbtb44-205ENSMUST00000216649 3157 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Clip4Q8CI96 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC13.44□□□□□ -0.26
Clip4Q8CI96 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Clip4Q8CI96 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Clip4Q8CI96 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Clip4Q8CI96 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clip4Q8CI96 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.44□□□□□ -0.26
Clip4Q8CI96 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.44□□□□□ -0.26
Clip4Q8CI96 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.44□□□□□ -0.26
Clip4Q8CI96 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.44□□□□□ -0.26
Clip4Q8CI96 Gm13385-201ENSMUST00000121089 220 ntBASIC13.44□□□□□ -0.26
Clip4Q8CI96 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.44□□□□□ -0.26
Clip4Q8CI96 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Clip4Q8CI96 Gm8927-201ENSMUST00000181978 981 ntBASIC13.44□□□□□ -0.26
Clip4Q8CI96 Gm37917-201ENSMUST00000194711 392 ntBASIC13.44□□□□□ -0.26
Clip4Q8CI96 Gm5279-201ENSMUST00000199575 745 ntBASIC13.44□□□□□ -0.26
Clip4Q8CI96 Gm18905-201ENSMUST00000205454 928 ntBASIC13.44□□□□□ -0.26
Clip4Q8CI96 Gm19220-201ENSMUST00000222682 803 ntBASIC13.44□□□□□ -0.26
Clip4Q8CI96 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC13.44□□□□□ -0.26
Clip4Q8CI96 Gm3222-201ENSMUST00000071282 990 ntBASIC13.44□□□□□ -0.26
Clip4Q8CI96 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Clip4Q8CI96 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Clip4Q8CI96 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clip4Q8CI96 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clip4Q8CI96 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC13.44□□□□□ -0.26
Clip4Q8CI96 Gm7899-201ENSMUST00000192935 1897 ntBASIC13.44□□□□□ -0.26
Clip4Q8CI96 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clip4Q8CI96 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Clip4Q8CI96 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.44□□□□□ -0.26
Clip4Q8CI96 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clip4Q8CI96 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clip4Q8CI96 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Clip4Q8CI96 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Clip4Q8CI96 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clip4Q8CI96 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Clip4Q8CI96 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.43□□□□□ -0.26
Clip4Q8CI96 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clip4Q8CI96 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Clip4Q8CI96 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Clip4Q8CI96 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Clip4Q8CI96 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Clip4Q8CI96 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Clip4Q8CI96 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clip4Q8CI96 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.43□□□□□ -0.26
Clip4Q8CI96 Gm14928-201ENSMUST00000120198 477 ntBASIC13.43□□□□□ -0.26
Clip4Q8CI96 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.43□□□□□ -0.26
Clip4Q8CI96 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC13.43□□□□□ -0.26
Clip4Q8CI96 Gm5354-201ENSMUST00000182417 973 ntBASIC13.43□□□□□ -0.26
Clip4Q8CI96 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.43□□□□□ -0.26
Clip4Q8CI96 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Clip4Q8CI96 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Clip4Q8CI96 AC154687.2-201ENSMUST00000223853 640 ntBASIC13.43□□□□□ -0.26
Clip4Q8CI96 Cript-201ENSMUST00000024959 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clip4Q8CI96 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clip4Q8CI96 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clip4Q8CI96 Gm15823-201ENSMUST00000064305 670 ntBASIC13.43□□□□□ -0.26
Clip4Q8CI96 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Clip4Q8CI96 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clip4Q8CI96 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clip4Q8CI96 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Clip4Q8CI96 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Clip4Q8CI96 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clip4Q8CI96 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Clip4Q8CI96 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Clip4Q8CI96 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Clip4Q8CI96 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 47.4 ms