Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab11fip3Q8CHD8 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rab11fip3Q8CHD8 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab11fip3Q8CHD8 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab11fip3Q8CHD8 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Rab11fip3Q8CHD8 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rab11fip3Q8CHD8 Gm18222-201ENSMUST00000202416 1387 ntBASIC17.19■□□□□ 0.34
Rab11fip3Q8CHD8 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab11fip3Q8CHD8 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Rab11fip3Q8CHD8 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab11fip3Q8CHD8 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab11fip3Q8CHD8 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Rab11fip3Q8CHD8 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC17.19■□□□□ 0.34
Rab11fip3Q8CHD8 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab11fip3Q8CHD8 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC17.19■□□□□ 0.34
Rab11fip3Q8CHD8 AC154462.2-201ENSMUST00000227519 370 ntBASIC17.19■□□□□ 0.34
Rab11fip3Q8CHD8 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab11fip3Q8CHD8 Majin-201ENSMUST00000025699 1239 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rab11fip3Q8CHD8 n-R5s195-201ENSMUST00000082891 119 ntBASIC17.19■□□□□ 0.34
Rab11fip3Q8CHD8 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab11fip3Q8CHD8 Gm4782-201ENSMUST00000168705 2046 ntBASIC17.19■□□□□ 0.34
Rab11fip3Q8CHD8 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rab11fip3Q8CHD8 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC17.19■□□□□ 0.34
Rab11fip3Q8CHD8 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rab11fip3Q8CHD8 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Rab11fip3Q8CHD8 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Rab11fip3Q8CHD8 Gm14608-201ENSMUST00000120030 1553 ntBASIC17.19■□□□□ 0.34
Rab11fip3Q8CHD8 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC17.19■□□□□ 0.34
Rab11fip3Q8CHD8 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab11fip3Q8CHD8 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab11fip3Q8CHD8 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC17.18■□□□□ 0.34
Rab11fip3Q8CHD8 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab11fip3Q8CHD8 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rab11fip3Q8CHD8 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rab11fip3Q8CHD8 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab11fip3Q8CHD8 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rab11fip3Q8CHD8 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Rab11fip3Q8CHD8 Gm15198-201ENSMUST00000117283 177 ntBASIC17.18■□□□□ 0.34
Rab11fip3Q8CHD8 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC17.18■□□□□ 0.34
Rab11fip3Q8CHD8 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rab11fip3Q8CHD8 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rab11fip3Q8CHD8 Gm42902-201ENSMUST00000199508 662 ntTSL 5 BASIC17.18■□□□□ 0.34
Rab11fip3Q8CHD8 Gm6458-201ENSMUST00000211573 635 ntBASIC17.18■□□□□ 0.34
Rab11fip3Q8CHD8 Cdc26-201ENSMUST00000084525 819 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab11fip3Q8CHD8 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab11fip3Q8CHD8 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Rab11fip3Q8CHD8 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab11fip3Q8CHD8 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab11fip3Q8CHD8 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC17.18■□□□□ 0.34
Rab11fip3Q8CHD8 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab11fip3Q8CHD8 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Rab11fip3Q8CHD8 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab11fip3Q8CHD8 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC17.18■□□□□ 0.34
Rab11fip3Q8CHD8 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Rab11fip3Q8CHD8 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Gm38391-201ENSMUST00000191720 4069 ntBASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Olfr521-201ENSMUST00000098263 967 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Rab11fip3Q8CHD8 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Rab11fip3Q8CHD8 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip3Q8CHD8 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip3Q8CHD8 Gm44291-201ENSMUST00000203102 2865 ntBASIC17.16■□□□□ 0.34
Rab11fip3Q8CHD8 Il17rd-203ENSMUST00000225146 3366 ntBASIC17.16■□□□□ 0.34
Rab11fip3Q8CHD8 Gm19863-201ENSMUST00000192480 2218 ntBASIC17.16■□□□□ 0.34
Rab11fip3Q8CHD8 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip3Q8CHD8 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rab11fip3Q8CHD8 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip3Q8CHD8 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Rab11fip3Q8CHD8 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Rab11fip3Q8CHD8 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms