Protein–RNA interactions for Protein: Q8CDG3

Vcpip1, Deubiquitinating protein VCIP135, mousemouse

Predictions only

Length 1,220 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcpip1Q8CDG3 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC14.35□□□□□ -0.11
Vcpip1Q8CDG3 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vcpip1Q8CDG3 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Vcpip1Q8CDG3 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Gm18187-201ENSMUST00000196476 984 ntBASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Gm17795-201ENSMUST00000214505 757 ntBASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Vcpip1Q8CDG3 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vcpip1Q8CDG3 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vcpip1Q8CDG3 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Vcpip1Q8CDG3 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.33□□□□□ -0.11
Vcpip1Q8CDG3 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Vcpip1Q8CDG3 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vcpip1Q8CDG3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vcpip1Q8CDG3 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vcpip1Q8CDG3 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vcpip1Q8CDG3 AC161252.3-201ENSMUST00000225465 1549 ntBASIC14.33□□□□□ -0.12
Vcpip1Q8CDG3 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC14.33□□□□□ -0.12
Vcpip1Q8CDG3 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC14.33□□□□□ -0.12
Vcpip1Q8CDG3 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.33□□□□□ -0.12
Vcpip1Q8CDG3 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.12
Vcpip1Q8CDG3 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC14.33□□□□□ -0.12
Vcpip1Q8CDG3 AC132467.2-202ENSMUST00000227726 559 ntBASIC14.33□□□□□ -0.12
Vcpip1Q8CDG3 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vcpip1Q8CDG3 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vcpip1Q8CDG3 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vcpip1Q8CDG3 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vcpip1Q8CDG3 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vcpip1Q8CDG3 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vcpip1Q8CDG3 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Vcpip1Q8CDG3 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Vcpip1Q8CDG3 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC14.33□□□□□ -0.12
Vcpip1Q8CDG3 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vcpip1Q8CDG3 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Vcpip1Q8CDG3 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Vcpip1Q8CDG3 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
Vcpip1Q8CDG3 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.33□□□□□ -0.12
Vcpip1Q8CDG3 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Vcpip1Q8CDG3 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Gm14719-201ENSMUST00000121891 340 ntBASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Gm21854-201ENSMUST00000179901 471 ntBASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Gm43433-201ENSMUST00000196573 481 ntBASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Slc10a7-204ENSMUST00000209992 939 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Vcpip1Q8CDG3 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms