Protein–RNA interactions for Protein: Q8CDD9

Lrif1, Ligand-dependent nuclear receptor-interacting factor 1, mousemouse

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrif1Q8CDD9 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lrif1Q8CDD9 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lrif1Q8CDD9 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lrif1Q8CDD9 Gm45643-201ENSMUST00000211364 1484 ntBASIC13.2□□□□□ -0.3
Lrif1Q8CDD9 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lrif1Q8CDD9 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lrif1Q8CDD9 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lrif1Q8CDD9 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lrif1Q8CDD9 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Lrif1Q8CDD9 Api5-201ENSMUST00000028617 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lrif1Q8CDD9 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lrif1Q8CDD9 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lrif1Q8CDD9 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Lrif1Q8CDD9 AL732309.2-201ENSMUST00000228052 3210 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Lrif1Q8CDD9 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lrif1Q8CDD9 Wnt7b-201ENSMUST00000023015 3371 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lrif1Q8CDD9 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Lrif1Q8CDD9 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Nudt18-202ENSMUST00000228554 3619 ntBASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Gm15678-201ENSMUST00000117573 960 ntBASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Gm6222-201ENSMUST00000120787 396 ntBASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Gm27533-201ENSMUST00000183800 152 ntBASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Gm18027-201ENSMUST00000218947 619 ntBASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 C1qtnf6-201ENSMUST00000023075 2402 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Esyt3-201ENSMUST00000042158 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Lrif1Q8CDD9 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Cdkl2-204ENSMUST00000113143 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Gm44344-201ENSMUST00000200287 129 ntBASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Mir497b-201ENSMUST00000093601 125 ntBASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Lrif1Q8CDD9 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms