Protein–RNA interactions for Protein: Q8C9F4

Gm9949, Predicted gene 9949, mousemouse

Predictions only

Length 104 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm9949Q8C9F4 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Gm7558-201ENSMUST00000193221 1165 ntBASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 AC135669.1-201ENSMUST00000213585 412 ntBASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Gm18624-201ENSMUST00000220966 658 ntBASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Gm19220-201ENSMUST00000222682 803 ntBASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Gm5466-201ENSMUST00000119395 1890 ntBASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Gm9949Q8C9F4 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Gm25925-201ENSMUST00000158314 306 ntBASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Gm42550-201ENSMUST00000201553 960 ntBASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Macrod2-204ENSMUST00000110062 3554 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC10.51□□□□□ -0.73
Gm9949Q8C9F4 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm9949Q8C9F4 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC10.5□□□□□ -0.73
Gm9949Q8C9F4 Gm15459-201ENSMUST00000117405 1941 ntBASIC10.5□□□□□ -0.73
Gm9949Q8C9F4 Gm8355-201ENSMUST00000177767 1941 ntBASIC10.5□□□□□ -0.73
Gm9949Q8C9F4 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm9949Q8C9F4 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm9949Q8C9F4 Gm10040-201ENSMUST00000080726 1662 ntBASIC10.5□□□□□ -0.73
Gm9949Q8C9F4 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC10.5□□□□□ -0.73
Gm9949Q8C9F4 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm9949Q8C9F4 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm9949Q8C9F4 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm9949Q8C9F4 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm9949Q8C9F4 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC10.5□□□□□ -0.73
Gm9949Q8C9F4 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm9949Q8C9F4 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm9949Q8C9F4 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC10.5□□□□□ -0.73
Gm9949Q8C9F4 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.5□□□□□ -0.73
Gm9949Q8C9F4 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC10.5□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms