Protein–RNA interactions for Protein: Q8C2E4

Ptcd1, Pentatricopeptide repeat-containing protein 1, mitochondrial, mousemouse

Known RBP Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptcd1Q8C2E4 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 AC134254.1-201ENSMUST00000221362 167 ntBASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 Gm12626-201ENSMUST00000117339 1983 ntBASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 Gm12623-201ENSMUST00000119849 1983 ntBASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 Ppp2r5c-204ENSMUST00000221074 1971 ntTSL 5 BASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 Rbm8a2-201ENSMUST00000104983 1338 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Ptcd1Q8C2E4 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Acot6-202ENSMUST00000222921 3622 ntBASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Gm5639-201ENSMUST00000122305 2403 ntBASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Gm12537-201ENSMUST00000119266 1002 ntBASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Gm12070-201ENSMUST00000119551 1002 ntBASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Gm12671-201ENSMUST00000119978 1002 ntBASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Gm13292-201ENSMUST00000120014 1000 ntBASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Gm11591-201ENSMUST00000120063 702 ntBASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Gm12403-201ENSMUST00000121384 959 ntBASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Gm10359-201ENSMUST00000180167 1002 ntBASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Gm12033-201ENSMUST00000180654 1002 ntBASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Gm5559-201ENSMUST00000180755 1002 ntBASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Gm4335-201ENSMUST00000182581 1004 ntBASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Gm19087-201ENSMUST00000191430 946 ntBASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Gm44291-201ENSMUST00000203102 2865 ntBASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Gm9333-201ENSMUST00000205452 1323 ntBASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Gm10040-201ENSMUST00000080726 1662 ntBASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Ptcd1Q8C2E4 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Gm13123-201ENSMUST00000122173 492 ntBASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Gm44985-201ENSMUST00000206202 1016 ntBASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 AC131997.1-201ENSMUST00000228611 1229 ntBASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Ptcd1Q8C2E4 Stx4a-202ENSMUST00000121705 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms