Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Gm24644-201ENSMUST00000157114 139 ntBASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Mir7221-201ENSMUST00000184009 72 ntBASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Gm42442-201ENSMUST00000197951 1133 ntBASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Nup54Q8BTS4 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Gm16202-201ENSMUST00000117532 544 ntBASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Gm15824-201ENSMUST00000119516 955 ntBASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 AC122305.4-201ENSMUST00000216159 1206 ntBASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Nup54Q8BTS4 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
Nup54Q8BTS4 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC13.61□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms