Protein–RNA interactions for Protein: Q8BLX7

Col16a1, Collagen alpha-1(XVI) chain, mousemouse

Predictions only

Length 1,580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col16a1Q8BLX7 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Col16a1Q8BLX7 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col16a1Q8BLX7 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC17.15■□□□□ 0.34
Col16a1Q8BLX7 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC17.15■□□□□ 0.34
Col16a1Q8BLX7 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col16a1Q8BLX7 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col16a1Q8BLX7 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC17.15■□□□□ 0.34
Col16a1Q8BLX7 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Col16a1Q8BLX7 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col16a1Q8BLX7 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col16a1Q8BLX7 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Col16a1Q8BLX7 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col16a1Q8BLX7 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Col16a1Q8BLX7 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC17.15■□□□□ 0.34
Col16a1Q8BLX7 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col16a1Q8BLX7 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col16a1Q8BLX7 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col16a1Q8BLX7 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col16a1Q8BLX7 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col16a1Q8BLX7 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col16a1Q8BLX7 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Col16a1Q8BLX7 Zar1l-201ENSMUST00000118769 895 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Col16a1Q8BLX7 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Col16a1Q8BLX7 Rbakdn-201ENSMUST00000198334 520 ntTSL 2 BASIC17.15■□□□□ 0.34
Col16a1Q8BLX7 Rprl1-202ENSMUST00000198476 238 ntBASIC17.15■□□□□ 0.34
Col16a1Q8BLX7 Gm43050-201ENSMUST00000201062 338 ntTSL 2 BASIC17.15■□□□□ 0.34
Col16a1Q8BLX7 Gm8285-201ENSMUST00000208293 759 ntBASIC17.15■□□□□ 0.34
Col16a1Q8BLX7 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Col16a1Q8BLX7 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Col16a1Q8BLX7 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Col16a1Q8BLX7 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
Col16a1Q8BLX7 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Col16a1Q8BLX7 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC17.14■□□□□ 0.33
Col16a1Q8BLX7 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Col16a1Q8BLX7 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col16a1Q8BLX7 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC17.14■□□□□ 0.33
Col16a1Q8BLX7 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col16a1Q8BLX7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col16a1Q8BLX7 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col16a1Q8BLX7 Gm23699-201ENSMUST00000158835 135 ntBASIC17.14■□□□□ 0.33
Col16a1Q8BLX7 Gm18734-201ENSMUST00000172937 808 ntBASIC17.14■□□□□ 0.33
Col16a1Q8BLX7 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Col16a1Q8BLX7 Gm9211-201ENSMUST00000182882 975 ntBASIC17.14■□□□□ 0.33
Col16a1Q8BLX7 S100a3-204ENSMUST00000200290 509 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col16a1Q8BLX7 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC17.14■□□□□ 0.33
Col16a1Q8BLX7 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col16a1Q8BLX7 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col16a1Q8BLX7 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col16a1Q8BLX7 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col16a1Q8BLX7 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col16a1Q8BLX7 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Col16a1Q8BLX7 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col16a1Q8BLX7 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col16a1Q8BLX7 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col16a1Q8BLX7 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col16a1Q8BLX7 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col16a1Q8BLX7 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Col16a1Q8BLX7 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col16a1Q8BLX7 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC17.13■□□□□ 0.33
Col16a1Q8BLX7 Cspp1-202ENSMUST00000117415 1272 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col16a1Q8BLX7 Gm14832-201ENSMUST00000121289 322 ntBASIC17.13■□□□□ 0.33
Col16a1Q8BLX7 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
Col16a1Q8BLX7 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC17.13■□□□□ 0.33
Col16a1Q8BLX7 Gm9550-201ENSMUST00000161130 862 ntBASIC17.13■□□□□ 0.33
Col16a1Q8BLX7 Ip6k2-204ENSMUST00000192307 1191 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Col16a1Q8BLX7 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col16a1Q8BLX7 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col16a1Q8BLX7 AC154222.2-201ENSMUST00000225848 607 ntBASIC17.13■□□□□ 0.33
Col16a1Q8BLX7 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col16a1Q8BLX7 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col16a1Q8BLX7 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Col16a1Q8BLX7 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col16a1Q8BLX7 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col16a1Q8BLX7 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Col16a1Q8BLX7 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Col16a1Q8BLX7 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col16a1Q8BLX7 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col16a1Q8BLX7 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Col16a1Q8BLX7 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC17.13■□□□□ 0.33
Col16a1Q8BLX7 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC17.12■□□□□ 0.33
Col16a1Q8BLX7 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col16a1Q8BLX7 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col16a1Q8BLX7 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col16a1Q8BLX7 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col16a1Q8BLX7 Ighv1-52-201ENSMUST00000103522 348 ntAPPRIS ALT2 BASIC17.12■□□□□ 0.33
Col16a1Q8BLX7 Folr1-201ENSMUST00000106981 960 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Col16a1Q8BLX7 Folr1-202ENSMUST00000106982 1039 ntAPPRIS P1 TSL 3 BASIC17.12■□□□□ 0.33
Col16a1Q8BLX7 Gm13296-201ENSMUST00000117854 997 ntBASIC17.12■□□□□ 0.33
Col16a1Q8BLX7 Gm12286-201ENSMUST00000119246 1002 ntBASIC17.12■□□□□ 0.33
Col16a1Q8BLX7 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col16a1Q8BLX7 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col16a1Q8BLX7 Gm17040-202ENSMUST00000170597 889 ntBASIC17.12■□□□□ 0.33
Col16a1Q8BLX7 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC17.12■□□□□ 0.33
Col16a1Q8BLX7 Gm44136-201ENSMUST00000203819 1106 ntBASIC17.12■□□□□ 0.33
Col16a1Q8BLX7 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col16a1Q8BLX7 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC17.12■□□□□ 0.33
Col16a1Q8BLX7 4933421D24Rik-201ENSMUST00000209302 1286 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Col16a1Q8BLX7 Gzmn-202ENSMUST00000225535 989 ntBASIC17.12■□□□□ 0.33
Col16a1Q8BLX7 AC108416.1-202ENSMUST00000228927 1201 ntBASIC17.12■□□□□ 0.33
Col16a1Q8BLX7 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms