Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Usp54Q8BL06 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp54Q8BL06 Gm2673-201ENSMUST00000120958 1608 ntBASIC18.6■□□□□ 0.57
Usp54Q8BL06 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Usp54Q8BL06 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Usp54Q8BL06 Gm28386-201ENSMUST00000189147 1849 ntBASIC18.6■□□□□ 0.57
Usp54Q8BL06 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC18.59■□□□□ 0.57
Usp54Q8BL06 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp54Q8BL06 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
Usp54Q8BL06 Gm13296-201ENSMUST00000117854 997 ntBASIC18.59■□□□□ 0.57
Usp54Q8BL06 n-R5s14-201ENSMUST00000122688 107 ntBASIC18.59■□□□□ 0.57
Usp54Q8BL06 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC18.59■□□□□ 0.57
Usp54Q8BL06 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC18.59■□□□□ 0.57
Usp54Q8BL06 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Usp54Q8BL06 Tmem116-209ENSMUST00000156080 1184 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp54Q8BL06 Gm18734-201ENSMUST00000172937 808 ntBASIC18.59■□□□□ 0.57
Usp54Q8BL06 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp54Q8BL06 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp54Q8BL06 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp54Q8BL06 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp54Q8BL06 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp54Q8BL06 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp54Q8BL06 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp54Q8BL06 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp54Q8BL06 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp54Q8BL06 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp54Q8BL06 Sp100-213ENSMUST00000155094 1666 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Usp54Q8BL06 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp54Q8BL06 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp54Q8BL06 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp54Q8BL06 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp54Q8BL06 Ins2-203ENSMUST00000105931 472 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Usp54Q8BL06 Gm14921-201ENSMUST00000118643 908 ntBASIC18.59■□□□□ 0.57
Usp54Q8BL06 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC18.59■□□□□ 0.57
Usp54Q8BL06 Gm43378-201ENSMUST00000199336 582 ntBASIC18.59■□□□□ 0.57
Usp54Q8BL06 1700012D14Rik-202ENSMUST00000209959 629 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Usp54Q8BL06 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp54Q8BL06 Asb18-202ENSMUST00000097656 788 ntTSL 5 BASIC18.59■□□□□ 0.57
Usp54Q8BL06 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
Usp54Q8BL06 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Usp54Q8BL06 Arhgef39-201ENSMUST00000054538 1659 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp54Q8BL06 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp54Q8BL06 Serpinb2-202ENSMUST00000064916 1996 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp54Q8BL06 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
Usp54Q8BL06 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Usp54Q8BL06 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
Usp54Q8BL06 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
Usp54Q8BL06 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp54Q8BL06 Chchd3-202ENSMUST00000115091 1363 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Usp54Q8BL06 Gm12380-201ENSMUST00000119012 544 ntBASIC18.58■□□□□ 0.56
Usp54Q8BL06 Mir1943-201ENSMUST00000158276 73 ntBASIC18.58■□□□□ 0.56
Usp54Q8BL06 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
Usp54Q8BL06 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC18.58■□□□□ 0.56
Usp54Q8BL06 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Usp54Q8BL06 Gm19187-201ENSMUST00000206781 892 ntBASIC18.58■□□□□ 0.56
Usp54Q8BL06 Gm44651-201ENSMUST00000207343 372 ntBASIC18.58■□□□□ 0.56
Usp54Q8BL06 Gm19994-201ENSMUST00000217086 586 ntBASIC18.58■□□□□ 0.56
Usp54Q8BL06 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp54Q8BL06 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp54Q8BL06 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp54Q8BL06 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp54Q8BL06 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Usp54Q8BL06 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Usp54Q8BL06 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp54Q8BL06 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp54Q8BL06 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC18.57■□□□□ 0.56
Usp54Q8BL06 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp54Q8BL06 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp54Q8BL06 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Usp54Q8BL06 Gm27552-201ENSMUST00000183351 62 ntBASIC18.57■□□□□ 0.56
Usp54Q8BL06 Gm27844-201ENSMUST00000183613 62 ntBASIC18.57■□□□□ 0.56
Usp54Q8BL06 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC18.57■□□□□ 0.56
Usp54Q8BL06 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Usp54Q8BL06 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp54Q8BL06 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp54Q8BL06 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp54Q8BL06 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp54Q8BL06 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp54Q8BL06 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp54Q8BL06 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp54Q8BL06 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp54Q8BL06 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp54Q8BL06 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp54Q8BL06 Luc7l-201ENSMUST00000025023 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Usp54Q8BL06 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Usp54Q8BL06 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Usp54Q8BL06 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
Usp54Q8BL06 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Usp54Q8BL06 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Usp54Q8BL06 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp54Q8BL06 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp54Q8BL06 AC110816.2-201ENSMUST00000220360 1323 ntTSL 5 BASIC18.56■□□□□ 0.56
Usp54Q8BL06 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
Usp54Q8BL06 Gm14999-201ENSMUST00000121039 624 ntBASIC18.56■□□□□ 0.56
Usp54Q8BL06 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC18.56■□□□□ 0.56
Usp54Q8BL06 Gm44100-201ENSMUST00000204329 436 ntBASIC18.56■□□□□ 0.56
Usp54Q8BL06 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Usp54Q8BL06 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Usp54Q8BL06 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC18.56■□□□□ 0.56
Usp54Q8BL06 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms