Protein–RNA interactions for Protein: Q8BJL0

Smarcal1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1, mousemouse

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcal1Q8BJL0 Gm28693-202ENSMUST00000190758 331 ntBASIC14.17□□□□□ -0.14
Smarcal1Q8BJL0 Gm37489-201ENSMUST00000191883 159 ntBASIC14.17□□□□□ -0.14
Smarcal1Q8BJL0 Gm38000-201ENSMUST00000192390 1215 ntBASIC14.17□□□□□ -0.14
Smarcal1Q8BJL0 n-R5s77-201ENSMUST00000083757 119 ntBASIC14.17□□□□□ -0.14
Smarcal1Q8BJL0 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcal1Q8BJL0 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcal1Q8BJL0 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcal1Q8BJL0 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcal1Q8BJL0 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcal1Q8BJL0 Fbxo44-208ENSMUST00000167160 1572 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Smarcal1Q8BJL0 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC14.17□□□□□ -0.14
Smarcal1Q8BJL0 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcal1Q8BJL0 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.17□□□□□ -0.14
Smarcal1Q8BJL0 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Smarcal1Q8BJL0 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Smarcal1Q8BJL0 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 4930581F22Rik-201ENSMUST00000093873 2402 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Mir877-201ENSMUST00000104738 85 ntBASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Gm14381-201ENSMUST00000122105 414 ntBASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Gm3890-201ENSMUST00000182416 207 ntBASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Gm18584-201ENSMUST00000203098 964 ntBASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Mea1-201ENSMUST00000002845 840 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Gm24526-201ENSMUST00000082921 158 ntBASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Gm14608-201ENSMUST00000120030 1553 ntBASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Cacna1g-203ENSMUST00000103166 8104 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Smarcal1Q8BJL0 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Gm15370-201ENSMUST00000117158 253 ntBASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Gm11222-201ENSMUST00000119005 738 ntBASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Gm6334-201ENSMUST00000207083 228 ntBASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Gm18056-201ENSMUST00000207670 568 ntBASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Gm18061-201ENSMUST00000208350 562 ntBASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Gm18063-201ENSMUST00000208529 568 ntBASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Gm18052-201ENSMUST00000208750 559 ntBASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Cryge-201ENSMUST00000087359 631 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Sgce-201ENSMUST00000004750 1703 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.15□□□□□ -0.14
Smarcal1Q8BJL0 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
Smarcal1Q8BJL0 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Smarcal1Q8BJL0 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms