Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Gm27618-201ENSMUST00000183671 60 ntBASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Gm8396-201ENSMUST00000057361 823 ntBASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Pck2-205ENSMUST00000226352 2784 ntBASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Pik3r6-202ENSMUST00000102613 3225 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Chmp2bQ8BJF9 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Fgf17-202ENSMUST00000227123 1336 ntBASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Ackr2-201ENSMUST00000050327 2853 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Gm15678-201ENSMUST00000117573 960 ntBASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Gm5425-201ENSMUST00000214125 459 ntBASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Gm6888-201ENSMUST00000221983 706 ntBASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Gm42480-201ENSMUST00000198434 2595 ntBASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Chmp2bQ8BJF9 Syt7-205ENSMUST00000224135 1557 ntBASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 AC154621.1-201ENSMUST00000226155 1119 ntBASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Chmp2bQ8BJF9 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 67.4 ms