Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Gm28760-201ENSMUST00000185995 736 ntBASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Coq7-205ENSMUST00000209146 799 ntTSL 3 BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Mest-202ENSMUST00000124665 2665 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Pcdh20Q8BIZ0 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.32
Pcdh20Q8BIZ0 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Pcdh20Q8BIZ0 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Pcdh20Q8BIZ0 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh20Q8BIZ0 Inpp5e-205ENSMUST00000145701 4147 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh20Q8BIZ0 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh20Q8BIZ0 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Pcdh20Q8BIZ0 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC13.02□□□□□ -0.32
Pcdh20Q8BIZ0 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh20Q8BIZ0 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh20Q8BIZ0 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pcdh20Q8BIZ0 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Pcdh20Q8BIZ0 Gm12859-201ENSMUST00000117834 427 ntBASIC13.02□□□□□ -0.33
Pcdh20Q8BIZ0 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.02□□□□□ -0.33
Pcdh20Q8BIZ0 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh20Q8BIZ0 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Pcdh20Q8BIZ0 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh20Q8BIZ0 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.02□□□□□ -0.33
Pcdh20Q8BIZ0 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pcdh20Q8BIZ0 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh20Q8BIZ0 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.02□□□□□ -0.33
Pcdh20Q8BIZ0 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh20Q8BIZ0 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh20Q8BIZ0 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh20Q8BIZ0 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh20Q8BIZ0 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pcdh20Q8BIZ0 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh20Q8BIZ0 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Pcdh20Q8BIZ0 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.02□□□□□ -0.33
Pcdh20Q8BIZ0 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh20Q8BIZ0 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh20Q8BIZ0 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Pcdh20Q8BIZ0 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Brd4-201ENSMUST00000003726 5955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Gm42612-201ENSMUST00000197986 623 ntBASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Gm43170-201ENSMUST00000199827 612 ntBASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Pcdh20Q8BIZ0 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms