Protein–RNA interactions for Protein: Q8BI21

Rnf38, E3 ubiquitin-protein ligase RNF38, mousemouse

Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf38Q8BI21 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Trim46-201ENSMUST00000041022 3122 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Rnf38Q8BI21 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.35
Rnf38Q8BI21 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Rnf38Q8BI21 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.9□□□□□ -0.35
Rnf38Q8BI21 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Prkag2-202ENSMUST00000076306 2838 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Khdrbs2-205ENSMUST00000189878 3259 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Gm27194-201ENSMUST00000175753 2936 ntBASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Smc5-202ENSMUST00000223934 3448 ntAPPRIS P2 BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Gm44344-201ENSMUST00000200287 129 ntBASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Sugp1-201ENSMUST00000011450 2681 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Rp2-202ENSMUST00000115387 4498 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Gm5466-201ENSMUST00000119395 1890 ntBASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Rnf38Q8BI21 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Slc25a25-201ENSMUST00000028160 3294 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Gm15770-201ENSMUST00000117498 584 ntBASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Gm27680-201ENSMUST00000184192 160 ntBASIC12.88□□□□□ -0.35
Rnf38Q8BI21 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Ccdc32-201ENSMUST00000036470 1870 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC12.88□□□□□ -0.35
Rnf38Q8BI21 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rnf38Q8BI21 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 72.6 ms