Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc116Q80X53 Galnt6-201ENSMUST00000052069 3798 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc116Q80X53 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc116Q80X53 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
Ccdc116Q80X53 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.08□□□□□ -0.32
Ccdc116Q80X53 AC137842.1-201ENSMUST00000227896 2064 ntBASIC13.08□□□□□ -0.32
Ccdc116Q80X53 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.08□□□□□ -0.32
Ccdc116Q80X53 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc116Q80X53 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Gm16215-201ENSMUST00000161990 637 ntBASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Gm6218-201ENSMUST00000219812 628 ntBASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Ldb3-207ENSMUST00000227819 1499 ntBASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
Ccdc116Q80X53 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Mir7221-201ENSMUST00000184009 72 ntBASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Gm45609-206ENSMUST00000210176 1023 ntTSL 5 BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Gm2594-201ENSMUST00000214774 742 ntBASIC13.06□□□□□ -0.32
Ccdc116Q80X53 AC124732.1-201ENSMUST00000221551 910 ntBASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Rsbn1l-201ENSMUST00000036489 5550 ntAPPRIS P2 TSL 5 BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ccdc116Q80X53 AC164107.1-201ENSMUST00000227730 2161 ntBASIC13.05□□□□□ -0.32
Ccdc116Q80X53 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc116Q80X53 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc116Q80X53 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.05□□□□□ -0.32
Ccdc116Q80X53 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc116Q80X53 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Ccdc116Q80X53 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc116Q80X53 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc116Q80X53 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc116Q80X53 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc116Q80X53 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc116Q80X53 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc116Q80X53 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ccdc116Q80X53 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 74.2 ms