Protein–RNA interactions for Protein: Q7TSG5

Sh3d21, SH3 domain-containing protein 21, mousemouse

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d21Q7TSG5 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3d21Q7TSG5 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Sh3d21Q7TSG5 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3d21Q7TSG5 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3d21Q7TSG5 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Sh3d21Q7TSG5 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Sh3d21Q7TSG5 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Gm37691-201ENSMUST00000192147 2573 ntBASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Plcb1-202ENSMUST00000110116 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 AC156560.2-201ENSMUST00000221232 264 ntBASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Sh3d21Q7TSG5 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3d21Q7TSG5 Pitpnm3-201ENSMUST00000075258 6555 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3d21Q7TSG5 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3d21Q7TSG5 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3d21Q7TSG5 Grk6-205ENSMUST00000224653 2976 ntBASIC14.59□□□□□ -0.07
Sh3d21Q7TSG5 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3d21Q7TSG5 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3d21Q7TSG5 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3d21Q7TSG5 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3d21Q7TSG5 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3d21Q7TSG5 Spag7-201ENSMUST00000018431 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3d21Q7TSG5 Gm38144-201ENSMUST00000192790 465 ntBASIC14.59□□□□□ -0.07
Sh3d21Q7TSG5 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.59□□□□□ -0.07
Sh3d21Q7TSG5 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Sh3d21Q7TSG5 Gm45691-201ENSMUST00000206905 1120 ntBASIC14.59□□□□□ -0.07
Sh3d21Q7TSG5 AC073947.2-201ENSMUST00000215888 1130 ntBASIC14.59□□□□□ -0.07
Sh3d21Q7TSG5 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3d21Q7TSG5 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC14.59□□□□□ -0.07
Sh3d21Q7TSG5 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3d21Q7TSG5 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3d21Q7TSG5 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Sh3d21Q7TSG5 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3d21Q7TSG5 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3d21Q7TSG5 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3d21Q7TSG5 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3d21Q7TSG5 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.59□□□□□ -0.07
Sh3d21Q7TSG5 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3d21Q7TSG5 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.59□□□□□ -0.07
Sh3d21Q7TSG5 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3d21Q7TSG5 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Sh3d21Q7TSG5 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sh3d21Q7TSG5 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sh3d21Q7TSG5 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sh3d21Q7TSG5 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
Sh3d21Q7TSG5 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.58□□□□□ -0.08
Sh3d21Q7TSG5 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3d21Q7TSG5 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3d21Q7TSG5 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Sh3d21Q7TSG5 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3d21Q7TSG5 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3d21Q7TSG5 Gm14716-201ENSMUST00000120138 718 ntBASIC14.58□□□□□ -0.08
Sh3d21Q7TSG5 Gm20753-201ENSMUST00000190105 545 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3d21Q7TSG5 Gm36991-201ENSMUST00000191800 648 ntBASIC14.58□□□□□ -0.08
Sh3d21Q7TSG5 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.58□□□□□ -0.08
Sh3d21Q7TSG5 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
Sh3d21Q7TSG5 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.58□□□□□ -0.08
Sh3d21Q7TSG5 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3d21Q7TSG5 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3d21Q7TSG5 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3d21Q7TSG5 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3d21Q7TSG5 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3d21Q7TSG5 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.58□□□□□ -0.08
Sh3d21Q7TSG5 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3d21Q7TSG5 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
Sh3d21Q7TSG5 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3d21Q7TSG5 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Sh3d21Q7TSG5 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 95.4 ms