Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ctdp1Q7TSG2 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC14.55□□□□□ -0.08
Ctdp1Q7TSG2 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ctdp1Q7TSG2 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 Nub1-201ENSMUST00000068825 3269 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 Gm44401-201ENSMUST00000204462 2375 ntBASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 Ddx27-201ENSMUST00000018143 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 Gm13223-201ENSMUST00000118609 747 ntBASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 Gm27680-201ENSMUST00000184192 160 ntBASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 Gm6916-202ENSMUST00000205523 195 ntBASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 Gm20949-201ENSMUST00000206478 952 ntBASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 Gm6888-201ENSMUST00000221983 706 ntBASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 Dnmbp-202ENSMUST00000212032 5074 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 AC116503.1-201ENSMUST00000215445 2192 ntBASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.54□□□□□ -0.08
Ctdp1Q7TSG2 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Tmem201-202ENSMUST00000103208 3620 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Bcl2l2-201ENSMUST00000022806 3509 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Gm13127-201ENSMUST00000118978 1389 ntBASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Gm15653-201ENSMUST00000119247 907 ntBASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Gm18934-201ENSMUST00000216671 1044 ntBASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Rbfox2-208ENSMUST00000227930 1218 ntBASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ctdp1Q7TSG2 Aurka-203ENSMUST00000109140 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ctdp1Q7TSG2 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ctdp1Q7TSG2 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ctdp1Q7TSG2 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ctdp1Q7TSG2 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ctdp1Q7TSG2 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ctdp1Q7TSG2 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.52□□□□□ -0.08
Ctdp1Q7TSG2 Naaladl1-201ENSMUST00000044451 2491 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
Ctdp1Q7TSG2 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ctdp1Q7TSG2 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ctdp1Q7TSG2 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Ctdp1Q7TSG2 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC14.52□□□□□ -0.08
Ctdp1Q7TSG2 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ctdp1Q7TSG2 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ctdp1Q7TSG2 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Ctdp1Q7TSG2 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.52□□□□□ -0.08
Ctdp1Q7TSG2 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ctdp1Q7TSG2 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ctdp1Q7TSG2 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ctdp1Q7TSG2 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.52□□□□□ -0.09
Ctdp1Q7TSG2 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.52□□□□□ -0.09
Ctdp1Q7TSG2 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.52□□□□□ -0.09
Ctdp1Q7TSG2 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC14.52□□□□□ -0.09
Ctdp1Q7TSG2 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ctdp1Q7TSG2 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Ctdp1Q7TSG2 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Ctdp1Q7TSG2 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Ctdp1Q7TSG2 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.52□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms