Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.98□□□□□ -0.33
Ubfd1Q78JW9 Gm2231-201ENSMUST00000125661 612 ntBASIC12.98□□□□□ -0.33
Ubfd1Q78JW9 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC12.98□□□□□ -0.33
Ubfd1Q78JW9 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ubfd1Q78JW9 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Ubfd1Q78JW9 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
Ubfd1Q78JW9 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.98□□□□□ -0.33
Ubfd1Q78JW9 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
Ubfd1Q78JW9 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubfd1Q78JW9 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Ubfd1Q78JW9 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.98□□□□□ -0.33
Ubfd1Q78JW9 AC122305.4-201ENSMUST00000216159 1206 ntBASIC12.98□□□□□ -0.33
Ubfd1Q78JW9 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubfd1Q78JW9 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Ubfd1Q78JW9 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubfd1Q78JW9 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubfd1Q78JW9 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubfd1Q78JW9 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubfd1Q78JW9 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubfd1Q78JW9 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubfd1Q78JW9 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubfd1Q78JW9 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC12.98□□□□□ -0.33
Ubfd1Q78JW9 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubfd1Q78JW9 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Ubfd1Q78JW9 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.98□□□□□ -0.33
Ubfd1Q78JW9 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Gm13123-201ENSMUST00000122173 492 ntBASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Gm10146-201ENSMUST00000072739 309 ntBASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Gm10268-201ENSMUST00000085340 555 ntBASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Ubfd1Q78JW9 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.96□□□□□ -0.33
Ubfd1Q78JW9 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ubfd1Q78JW9 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ubfd1Q78JW9 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ubfd1Q78JW9 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ubfd1Q78JW9 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ubfd1Q78JW9 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.96□□□□□ -0.33
Ubfd1Q78JW9 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ubfd1Q78JW9 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ubfd1Q78JW9 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ubfd1Q78JW9 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ubfd1Q78JW9 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ubfd1Q78JW9 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC12.96□□□□□ -0.33
Ubfd1Q78JW9 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Ubfd1Q78JW9 Gm5187-201ENSMUST00000117317 991 ntBASIC12.96□□□□□ -0.33
Ubfd1Q78JW9 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC12.96□□□□□ -0.33
Ubfd1Q78JW9 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Ubfd1Q78JW9 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
Ubfd1Q78JW9 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.96□□□□□ -0.33
Ubfd1Q78JW9 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC12.96□□□□□ -0.33
Ubfd1Q78JW9 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Ubfd1Q78JW9 Olfr1346-201ENSMUST00000056144 1051 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Ubfd1Q78JW9 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Ubfd1Q78JW9 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Ubfd1Q78JW9 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Ubfd1Q78JW9 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Ubfd1Q78JW9 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC12.96□□□□□ -0.33
Ubfd1Q78JW9 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.96□□□□□ -0.33
Ubfd1Q78JW9 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
Ubfd1Q78JW9 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ubfd1Q78JW9 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ubfd1Q78JW9 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ubfd1Q78JW9 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ubfd1Q78JW9 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ubfd1Q78JW9 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ubfd1Q78JW9 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ubfd1Q78JW9 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Ubfd1Q78JW9 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Ubfd1Q78JW9 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms