Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf220Q6PDX6 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf220Q6PDX6 Gdpd2-201ENSMUST00000019503 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf220Q6PDX6 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Rnf220Q6PDX6 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Apbb1-201ENSMUST00000081165 2530 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 B4galt1-201ENSMUST00000030121 3983 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Tnip1-201ENSMUST00000018482 2810 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Gm6973-201ENSMUST00000117080 721 ntBASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Gm44492-201ENSMUST00000197012 141 ntBASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 4930519L02Rik-201ENSMUST00000197683 619 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Gm43332-201ENSMUST00000202511 1044 ntBASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Gm2270-201ENSMUST00000222858 797 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Pex26-202ENSMUST00000118234 3778 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Zfp618-202ENSMUST00000064814 2868 ntAPPRIS P2 TSL 5 BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Zfp772-201ENSMUST00000074455 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Rgma-202ENSMUST00000119206 3481 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Hexim1-201ENSMUST00000053063 3495 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Rnf220Q6PDX6 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Gm20687-203ENSMUST00000185121 4242 ntTSL 2 BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Tfr2-204ENSMUST00000196471 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Gm11543-201ENSMUST00000120758 370 ntBASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Gm1401-201ENSMUST00000122048 772 ntBASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Gm18737-201ENSMUST00000173594 937 ntBASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Dennd2d-201ENSMUST00000029508 4050 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Tax1bp1-201ENSMUST00000080723 3285 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Serpinb12-201ENSMUST00000081277 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Pml-211ENSMUST00000153820 2652 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Pak6-201ENSMUST00000099557 4411 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Gm10110-202ENSMUST00000228705 3220 ntBASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Slx4ip-206ENSMUST00000180277 2723 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Gm32479-201ENSMUST00000204226 2739 ntTSL 2 BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Rnf220Q6PDX6 Gm10604-201ENSMUST00000098260 1706 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Pnpla6-202ENSMUST00000111070 4496 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Polrmt-201ENSMUST00000020580 3755 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Gm5763-201ENSMUST00000155951 1530 ntBASIC12.59□□□□□ -0.39
Rnf220Q6PDX6 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.2 ms