Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd4Q6PDQ2 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC17.07■□□□□ 0.32
Chd4Q6PDQ2 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd4Q6PDQ2 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd4Q6PDQ2 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chd4Q6PDQ2 Car6-201ENSMUST00000030817 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd4Q6PDQ2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd4Q6PDQ2 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
Chd4Q6PDQ2 Phkg1-201ENSMUST00000026617 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd4Q6PDQ2 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chd4Q6PDQ2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd4Q6PDQ2 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd4Q6PDQ2 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
Chd4Q6PDQ2 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC17.07■□□□□ 0.32
Chd4Q6PDQ2 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
Chd4Q6PDQ2 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC17.07■□□□□ 0.32
Chd4Q6PDQ2 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd4Q6PDQ2 Crry-ps-201ENSMUST00000079090 1309 ntBASIC17.07■□□□□ 0.32
Chd4Q6PDQ2 Shbg-201ENSMUST00000005334 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd4Q6PDQ2 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Chd4Q6PDQ2 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd4Q6PDQ2 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd4Q6PDQ2 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd4Q6PDQ2 Rps10-203ENSMUST00000114882 614 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd4Q6PDQ2 Gm14277-201ENSMUST00000121195 360 ntBASIC17.06■□□□□ 0.32
Chd4Q6PDQ2 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC17.06■□□□□ 0.32
Chd4Q6PDQ2 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC17.06■□□□□ 0.32
Chd4Q6PDQ2 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chd4Q6PDQ2 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd4Q6PDQ2 Gm44405-201ENSMUST00000198952 126 ntBASIC17.06■□□□□ 0.32
Chd4Q6PDQ2 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chd4Q6PDQ2 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC17.06■□□□□ 0.32
Chd4Q6PDQ2 Gm32141-201ENSMUST00000220189 488 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chd4Q6PDQ2 AC123665.1-201ENSMUST00000228204 438 ntBASIC17.06■□□□□ 0.32
Chd4Q6PDQ2 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd4Q6PDQ2 Etfrf1-203ENSMUST00000111721 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd4Q6PDQ2 Rabggtb-201ENSMUST00000089950 1381 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Chd4Q6PDQ2 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd4Q6PDQ2 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd4Q6PDQ2 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd4Q6PDQ2 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd4Q6PDQ2 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd4Q6PDQ2 Gm19994-201ENSMUST00000217086 586 ntBASIC17.06■□□□□ 0.32
Chd4Q6PDQ2 Tmem210-201ENSMUST00000028340 516 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Chd4Q6PDQ2 Nmral1-201ENSMUST00000074970 1155 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Chd4Q6PDQ2 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd4Q6PDQ2 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd4Q6PDQ2 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
Chd4Q6PDQ2 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chd4Q6PDQ2 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd4Q6PDQ2 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd4Q6PDQ2 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd4Q6PDQ2 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd4Q6PDQ2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd4Q6PDQ2 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chd4Q6PDQ2 Phf8-205ENSMUST00000112668 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd4Q6PDQ2 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd4Q6PDQ2 Gm11772-201ENSMUST00000136542 532 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chd4Q6PDQ2 C130026I21Rik-205ENSMUST00000161267 652 ntAPPRIS ALT2 TSL 3 BASIC17.05■□□□□ 0.32
Chd4Q6PDQ2 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
Chd4Q6PDQ2 H2afz-206ENSMUST00000173790 437 ntTSL 5 BASIC17.05■□□□□ 0.32
Chd4Q6PDQ2 Gm45691-201ENSMUST00000206905 1120 ntBASIC17.05■□□□□ 0.32
Chd4Q6PDQ2 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Chd4Q6PDQ2 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd4Q6PDQ2 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Chd4Q6PDQ2 Wac-216ENSMUST00000171486 1608 ntTSL 5 BASIC17.05■□□□□ 0.32
Chd4Q6PDQ2 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Gm10782-202ENSMUST00000223775 1480 ntBASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Gm5846-201ENSMUST00000193146 1414 ntBASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Gm16099-202ENSMUST00000151873 660 ntTSL 5 BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Gm11630-201ENSMUST00000152825 382 ntTSL 2 BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Cabp2-202ENSMUST00000159556 781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 AC131743.2-201ENSMUST00000221031 968 ntTSL 5 BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Ptpn14-201ENSMUST00000027898 2666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Gm8798-201ENSMUST00000211877 1661 ntBASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Stau2-214ENSMUST00000162007 2964 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Rpl15-203ENSMUST00000100799 802 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Gm6963-201ENSMUST00000147879 379 ntBASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 Gm24845-201ENSMUST00000158034 109 ntBASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 4930539M17Rik-201ENSMUST00000194792 846 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Chd4Q6PDQ2 4921530L21Rik-202ENSMUST00000228913 1115 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms