Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Usp10-210ENSMUST00000144458 3726 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Epm2aip1-201ENSMUST00000060711 7149 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
Smarcd3Q6P9Z1 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Wdr81-204ENSMUST00000173320 6908 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Gm38355-201ENSMUST00000192514 1570 ntBASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 AC154767.3-201ENSMUST00000225150 1342 ntBASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Bcl2l13-201ENSMUST00000009256 6925 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Smarcd3Q6P9Z1 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Mbd3-202ENSMUST00000105347 914 ntTSL 2 BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Gm25948-201ENSMUST00000175334 112 ntBASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Gm44344-201ENSMUST00000200287 129 ntBASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Gm3695-201ENSMUST00000087222 1009 ntBASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Pdlim4-202ENSMUST00000093109 962 ntTSL 5 BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Kif13a-201ENSMUST00000056978 6866 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
Smarcd3Q6P9Z1 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC12.22□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms