Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC13.54□□□□□ -0.24
Sp140Q6NSQ5 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC13.54□□□□□ -0.24
Sp140Q6NSQ5 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sp140Q6NSQ5 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sp140Q6NSQ5 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sp140Q6NSQ5 Set-202ENSMUST00000102866 2824 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sp140Q6NSQ5 Cnot3-201ENSMUST00000038913 2822 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sp140Q6NSQ5 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sp140Q6NSQ5 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sp140Q6NSQ5 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC13.54□□□□□ -0.24
Sp140Q6NSQ5 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sp140Q6NSQ5 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sp140Q6NSQ5 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC13.54□□□□□ -0.24
Sp140Q6NSQ5 Tmem2-202ENSMUST00000096194 6667 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Sp140Q6NSQ5 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.54□□□□□ -0.24
Sp140Q6NSQ5 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.54□□□□□ -0.24
Sp140Q6NSQ5 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Sp140Q6NSQ5 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Sp140Q6NSQ5 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sp140Q6NSQ5 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Sp140Q6NSQ5 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sp140Q6NSQ5 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC13.53□□□□□ -0.24
Sp140Q6NSQ5 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sp140Q6NSQ5 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.53□□□□□ -0.24
Sp140Q6NSQ5 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sp140Q6NSQ5 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
Sp140Q6NSQ5 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sp140Q6NSQ5 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sp140Q6NSQ5 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.53□□□□□ -0.24
Sp140Q6NSQ5 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sp140Q6NSQ5 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sp140Q6NSQ5 Gm45841-201ENSMUST00000207700 164 ntBASIC13.53□□□□□ -0.24
Sp140Q6NSQ5 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC13.53□□□□□ -0.24
Sp140Q6NSQ5 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.53□□□□□ -0.24
Sp140Q6NSQ5 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sp140Q6NSQ5 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Sp140Q6NSQ5 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sp140Q6NSQ5 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sp140Q6NSQ5 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sp140Q6NSQ5 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.53□□□□□ -0.24
Sp140Q6NSQ5 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Sp140Q6NSQ5 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Sp140Q6NSQ5 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sp140Q6NSQ5 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sp140Q6NSQ5 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sp140Q6NSQ5 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Sp140Q6NSQ5 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sp140Q6NSQ5 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
Sp140Q6NSQ5 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC13.52□□□□□ -0.24
Sp140Q6NSQ5 Fbxo48-201ENSMUST00000061327 2117 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sp140Q6NSQ5 Gm7002-201ENSMUST00000221386 2165 ntBASIC13.52□□□□□ -0.24
Sp140Q6NSQ5 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Sp140Q6NSQ5 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sp140Q6NSQ5 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Sp140Q6NSQ5 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sp140Q6NSQ5 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC13.52□□□□□ -0.25
Sp140Q6NSQ5 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Sp140Q6NSQ5 Gm5354-201ENSMUST00000182417 973 ntBASIC13.52□□□□□ -0.25
Sp140Q6NSQ5 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC13.52□□□□□ -0.25
Sp140Q6NSQ5 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.52□□□□□ -0.25
Sp140Q6NSQ5 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.52□□□□□ -0.25
Sp140Q6NSQ5 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.52□□□□□ -0.25
Sp140Q6NSQ5 AC125206.2-201ENSMUST00000217454 574 ntBASIC13.52□□□□□ -0.25
Sp140Q6NSQ5 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.52□□□□□ -0.25
Sp140Q6NSQ5 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sp140Q6NSQ5 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.52□□□□□ -0.25
Sp140Q6NSQ5 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.52□□□□□ -0.25
Sp140Q6NSQ5 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sp140Q6NSQ5 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sp140Q6NSQ5 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sp140Q6NSQ5 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sp140Q6NSQ5 Cyb561d1-202ENSMUST00000106654 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sp140Q6NSQ5 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.52□□□□□ -0.25
Sp140Q6NSQ5 Gm45706-201ENSMUST00000213063 2136 ntBASIC13.52□□□□□ -0.25
Sp140Q6NSQ5 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sp140Q6NSQ5 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sp140Q6NSQ5 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Sp140Q6NSQ5 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sp140Q6NSQ5 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC13.52□□□□□ -0.25
Sp140Q6NSQ5 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC13.52□□□□□ -0.25
Sp140Q6NSQ5 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Sp140Q6NSQ5 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sp140Q6NSQ5 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Sp140Q6NSQ5 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sp140Q6NSQ5 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sp140Q6NSQ5 Nrf1-209ENSMUST00000115209 2406 ntTSL 5 BASIC13.51□□□□□ -0.25
Sp140Q6NSQ5 Zfp207-206ENSMUST00000165565 2311 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sp140Q6NSQ5 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sp140Q6NSQ5 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sp140Q6NSQ5 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.51□□□□□ -0.25
Sp140Q6NSQ5 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Sp140Q6NSQ5 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Sp140Q6NSQ5 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.51□□□□□ -0.25
Sp140Q6NSQ5 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.51□□□□□ -0.25
Sp140Q6NSQ5 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC13.51□□□□□ -0.25
Sp140Q6NSQ5 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC13.51□□□□□ -0.25
Sp140Q6NSQ5 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC13.51□□□□□ -0.25
Sp140Q6NSQ5 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC13.51□□□□□ -0.25
Sp140Q6NSQ5 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC13.51□□□□□ -0.25
Sp140Q6NSQ5 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms