Protein–RNA interactions for Protein: Q64727

Vcl, Vinculin, mousemouse

Known RBP Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VclQ64727 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VclQ64727 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.11□□□□□ -0.31
VclQ64727 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
VclQ64727 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
VclQ64727 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VclQ64727 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VclQ64727 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VclQ64727 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VclQ64727 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VclQ64727 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VclQ64727 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VclQ64727 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VclQ64727 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
VclQ64727 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
VclQ64727 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VclQ64727 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
VclQ64727 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
VclQ64727 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.11□□□□□ -0.31
VclQ64727 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.1□□□□□ -0.31
VclQ64727 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VclQ64727 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
VclQ64727 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VclQ64727 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.1□□□□□ -0.31
VclQ64727 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
VclQ64727 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.1□□□□□ -0.31
VclQ64727 Kif3b-201ENSMUST00000028977 5635 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VclQ64727 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VclQ64727 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VclQ64727 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VclQ64727 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VclQ64727 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VclQ64727 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VclQ64727 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
VclQ64727 Gm4984-201ENSMUST00000115987 360 ntBASIC13.1□□□□□ -0.31
VclQ64727 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC13.1□□□□□ -0.31
VclQ64727 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC13.1□□□□□ -0.31
VclQ64727 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
VclQ64727 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VclQ64727 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
VclQ64727 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VclQ64727 AC173210.1-201ENSMUST00000222341 1131 ntBASIC13.1□□□□□ -0.31
VclQ64727 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VclQ64727 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
VclQ64727 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
VclQ64727 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VclQ64727 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.1□□□□□ -0.31
VclQ64727 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VclQ64727 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
VclQ64727 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
VclQ64727 Abcc5-202ENSMUST00000079158 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VclQ64727 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VclQ64727 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
VclQ64727 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
VclQ64727 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
VclQ64727 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
VclQ64727 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VclQ64727 Otud7b-201ENSMUST00000035519 8043 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VclQ64727 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VclQ64727 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
VclQ64727 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
VclQ64727 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VclQ64727 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VclQ64727 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
VclQ64727 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.09□□□□□ -0.31
VclQ64727 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
VclQ64727 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VclQ64727 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VclQ64727 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VclQ64727 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC13.09□□□□□ -0.31
VclQ64727 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VclQ64727 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.09□□□□□ -0.31
VclQ64727 Tssc4-202ENSMUST00000105920 895 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VclQ64727 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
VclQ64727 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC13.09□□□□□ -0.31
VclQ64727 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC13.09□□□□□ -0.31
VclQ64727 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VclQ64727 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC13.09□□□□□ -0.31
VclQ64727 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VclQ64727 Gm8602-201ENSMUST00000184045 607 ntBASIC13.09□□□□□ -0.31
VclQ64727 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
VclQ64727 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VclQ64727 Gm5035-201ENSMUST00000215581 927 ntBASIC13.09□□□□□ -0.31
VclQ64727 Pemt-201ENSMUST00000000310 953 ntAPPRIS P1 TSL 3 BASIC13.09□□□□□ -0.31
VclQ64727 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VclQ64727 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
VclQ64727 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VclQ64727 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
VclQ64727 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VclQ64727 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
VclQ64727 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VclQ64727 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VclQ64727 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VclQ64727 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VclQ64727 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
VclQ64727 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
VclQ64727 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
VclQ64727 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.09□□□□□ -0.31
VclQ64727 Insrr-202ENSMUST00000107582 4694 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
VclQ64727 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
VclQ64727 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms