Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Gm18974-201ENSMUST00000221478 1031 ntBASIC12.3□□□□□ -0.44
AtmQ62388 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AtmQ62388 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.3□□□□□ -0.44
AtmQ62388 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AtmQ62388 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AtmQ62388 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AtmQ62388 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AtmQ62388 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.3□□□□□ -0.44
AtmQ62388 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.3□□□□□ -0.44
AtmQ62388 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AtmQ62388 Serpina16-202ENSMUST00000164148 1582 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
AtmQ62388 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.3□□□□□ -0.44
AtmQ62388 Cd79b-201ENSMUST00000044228 1431 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
AtmQ62388 Gm13296-201ENSMUST00000117854 997 ntBASIC12.3□□□□□ -0.44
AtmQ62388 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.3□□□□□ -0.44
AtmQ62388 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
AtmQ62388 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AtmQ62388 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AtmQ62388 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
AtmQ62388 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
AtmQ62388 Tmcc2-206ENSMUST00000142609 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
AtmQ62388 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
AtmQ62388 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AtmQ62388 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
AtmQ62388 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
AtmQ62388 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
AtmQ62388 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC12.3□□□□□ -0.44
AtmQ62388 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
AtmQ62388 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
AtmQ62388 Sox5os3-201ENSMUST00000139351 906 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
AtmQ62388 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AtmQ62388 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AtmQ62388 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
AtmQ62388 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC12.29□□□□□ -0.44
AtmQ62388 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
AtmQ62388 AC101945.2-201ENSMUST00000227886 1377 ntBASIC12.29□□□□□ -0.44
AtmQ62388 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AtmQ62388 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AtmQ62388 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
AtmQ62388 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AtmQ62388 Ighv10-1-201ENSMUST00000103492 359 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
AtmQ62388 BC026585-202ENSMUST00000119891 1125 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
AtmQ62388 Gm12969-201ENSMUST00000120199 1004 ntBASIC12.29□□□□□ -0.44
AtmQ62388 Gm11450-201ENSMUST00000121144 333 ntBASIC12.29□□□□□ -0.44
AtmQ62388 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
AtmQ62388 Gm6867-201ENSMUST00000219165 425 ntBASIC12.29□□□□□ -0.44
AtmQ62388 AC140375.1-201ENSMUST00000225421 694 ntBASIC12.29□□□□□ -0.44
AtmQ62388 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
AtmQ62388 Ikzf1-201ENSMUST00000018798 1542 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
AtmQ62388 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AtmQ62388 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AtmQ62388 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AtmQ62388 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AtmQ62388 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
AtmQ62388 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AtmQ62388 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AtmQ62388 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.29□□□□□ -0.44
AtmQ62388 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AtmQ62388 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AtmQ62388 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
AtmQ62388 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC12.29□□□□□ -0.44
AtmQ62388 Nppa-201ENSMUST00000103230 865 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AtmQ62388 Inca1-202ENSMUST00000108541 1150 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
AtmQ62388 Gm6039-201ENSMUST00000121667 1250 ntBASIC12.29□□□□□ -0.44
AtmQ62388 Inca1-205ENSMUST00000126114 1189 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
AtmQ62388 Gm4131-201ENSMUST00000186010 1264 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
AtmQ62388 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
AtmQ62388 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC12.29□□□□□ -0.44
AtmQ62388 Sssca1-201ENSMUST00000025885 693 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AtmQ62388 Inca1-201ENSMUST00000073625 1218 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
AtmQ62388 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AtmQ62388 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
AtmQ62388 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AtmQ62388 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AtmQ62388 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AtmQ62388 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
AtmQ62388 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
AtmQ62388 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
AtmQ62388 5330413P13Rik-204ENSMUST00000210606 1464 ntTSL 5 BASIC12.28□□□□□ -0.44
AtmQ62388 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
AtmQ62388 Scube1-203ENSMUST00000076060 3913 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
AtmQ62388 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AtmQ62388 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
AtmQ62388 Gm14051-201ENSMUST00000131603 377 ntTSL 3 BASIC12.28□□□□□ -0.44
AtmQ62388 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
AtmQ62388 Gm44772-201ENSMUST00000207623 1191 ntBASIC12.28□□□□□ -0.44
AtmQ62388 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AtmQ62388 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
AtmQ62388 AC162938.2-204ENSMUST00000216455 984 ntTSL 5 BASIC12.28□□□□□ -0.44
AtmQ62388 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.28□□□□□ -0.44
AtmQ62388 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC12.28□□□□□ -0.44
AtmQ62388 AC091458.1-201ENSMUST00000220902 1361 ntBASIC12.28□□□□□ -0.44
AtmQ62388 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
AtmQ62388 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
AtmQ62388 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AtmQ62388 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
AtmQ62388 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AtmQ62388 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AtmQ62388 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
AtmQ62388 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms