Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ctr9Q62018 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ctr9Q62018 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ctr9Q62018 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ctr9Q62018 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ctr9Q62018 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC15.71■□□□□ 0.11
Ctr9Q62018 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ctr9Q62018 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ctr9Q62018 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ctr9Q62018 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ctr9Q62018 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ctr9Q62018 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ctr9Q62018 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ctr9Q62018 Gm14660-201ENSMUST00000119809 575 ntBASIC15.71■□□□□ 0.11
Ctr9Q62018 Gm16177-201ENSMUST00000120728 718 ntBASIC15.71■□□□□ 0.11
Ctr9Q62018 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ctr9Q62018 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC15.71■□□□□ 0.11
Ctr9Q62018 AY702102-202ENSMUST00000194651 1173 ntBASIC15.71■□□□□ 0.11
Ctr9Q62018 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ctr9Q62018 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.71■□□□□ 0.11
Ctr9Q62018 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ctr9Q62018 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC15.71■□□□□ 0.11
Ctr9Q62018 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.71■□□□□ 0.11
Ctr9Q62018 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ctr9Q62018 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ctr9Q62018 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ctr9Q62018 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC15.71■□□□□ 0.11
Ctr9Q62018 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ctr9Q62018 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ctr9Q62018 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ctr9Q62018 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ctr9Q62018 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ctr9Q62018 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ctr9Q62018 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ctr9Q62018 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Ctr9Q62018 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ctr9Q62018 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ctr9Q62018 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ctr9Q62018 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ctr9Q62018 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ctr9Q62018 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ctr9Q62018 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.71■□□□□ 0.1
Ctr9Q62018 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Ctr9Q62018 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ctr9Q62018 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ctr9Q62018 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ctr9Q62018 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ctr9Q62018 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ctr9Q62018 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Ctr9Q62018 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
Ctr9Q62018 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ctr9Q62018 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ctr9Q62018 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC15.7■□□□□ 0.1
Ctr9Q62018 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC15.7■□□□□ 0.1
Ctr9Q62018 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ctr9Q62018 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ctr9Q62018 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC15.7■□□□□ 0.1
Ctr9Q62018 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.7■□□□□ 0.1
Ctr9Q62018 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ctr9Q62018 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC15.7■□□□□ 0.1
Ctr9Q62018 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Ctr9Q62018 Gm27731-201ENSMUST00000185192 107 ntBASIC15.7■□□□□ 0.1
Ctr9Q62018 Gm45784-201ENSMUST00000188360 142 ntBASIC15.7■□□□□ 0.1
Ctr9Q62018 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ctr9Q62018 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC15.7■□□□□ 0.1
Ctr9Q62018 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ctr9Q62018 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.7■□□□□ 0.1
Ctr9Q62018 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.7■□□□□ 0.1
Ctr9Q62018 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.7■□□□□ 0.1
Ctr9Q62018 AC173210.1-201ENSMUST00000222341 1131 ntBASIC15.7■□□□□ 0.1
Ctr9Q62018 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ctr9Q62018 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ctr9Q62018 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ctr9Q62018 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ctr9Q62018 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ctr9Q62018 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.7■□□□□ 0.1
Ctr9Q62018 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ctr9Q62018 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.7■□□□□ 0.1
Ctr9Q62018 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ctr9Q62018 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ctr9Q62018 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC15.7■□□□□ 0.1
Ctr9Q62018 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ctr9Q62018 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ctr9Q62018 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC15.7■□□□□ 0.1
Ctr9Q62018 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ctr9Q62018 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ctr9Q62018 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ctr9Q62018 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ctr9Q62018 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.69■□□□□ 0.1
Ctr9Q62018 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Ctr9Q62018 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC15.69■□□□□ 0.1
Ctr9Q62018 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ctr9Q62018 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ctr9Q62018 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ctr9Q62018 Tpd52l2-203ENSMUST00000108799 985 ntTSL 5 BASIC15.69■□□□□ 0.1
Ctr9Q62018 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Ctr9Q62018 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ctr9Q62018 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ctr9Q62018 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Ctr9Q62018 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.69■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37 ms