Protein–RNA interactions for Protein: Q61466

Smarcd1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, mousemouse

Known RBP Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd1Q61466 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd1Q61466 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd1Q61466 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd1Q61466 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Smarcd1Q61466 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Smarcd1Q61466 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd1Q61466 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd1Q61466 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd1Q61466 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd1Q61466 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd1Q61466 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.87□□□□□ -0.19
Smarcd1Q61466 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd1Q61466 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd1Q61466 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC13.87□□□□□ -0.19
Smarcd1Q61466 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd1Q61466 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Smarcd1Q61466 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Gm13369-201ENSMUST00000119442 987 ntBASIC13.86□□□□□ -0.19
Smarcd1Q61466 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Mir7085-201ENSMUST00000184353 66 ntBASIC13.86□□□□□ -0.19
Smarcd1Q61466 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Gm37497-201ENSMUST00000195830 798 ntBASIC13.86□□□□□ -0.19
Smarcd1Q61466 Gm43818-201ENSMUST00000200605 466 ntBASIC13.86□□□□□ -0.19
Smarcd1Q61466 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Smarcd1Q61466 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Smarcd1Q61466 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Mir874-201ENSMUST00000104769 76 ntBASIC13.85□□□□□ -0.19
Smarcd1Q61466 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Gm14660-201ENSMUST00000119809 575 ntBASIC13.85□□□□□ -0.19
Smarcd1Q61466 Gm13123-201ENSMUST00000122173 492 ntBASIC13.85□□□□□ -0.19
Smarcd1Q61466 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Gm27731-201ENSMUST00000185192 107 ntBASIC13.85□□□□□ -0.19
Smarcd1Q61466 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Gm40466-201ENSMUST00000212174 422 ntBASIC13.85□□□□□ -0.19
Smarcd1Q61466 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Smarcd1Q61466 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Smarcd1Q61466 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms