Protein–RNA interactions for Protein: Q61457

Ccne1, G1/S-specific cyclin-E1, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccne1Q61457 AC069562.3-201ENSMUST00000225387 587 ntBASIC17.24■□□□□ 0.35
Ccne1Q61457 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccne1Q61457 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccne1Q61457 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccne1Q61457 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccne1Q61457 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Ccne1Q61457 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccne1Q61457 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccne1Q61457 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccne1Q61457 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccne1Q61457 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Ccne1Q61457 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC17.23■□□□□ 0.35
Ccne1Q61457 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccne1Q61457 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccne1Q61457 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccne1Q61457 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccne1Q61457 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccne1Q61457 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccne1Q61457 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccne1Q61457 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccne1Q61457 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccne1Q61457 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC17.23■□□□□ 0.35
Ccne1Q61457 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccne1Q61457 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccne1Q61457 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC17.23■□□□□ 0.35
Ccne1Q61457 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccne1Q61457 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccne1Q61457 1700120B22Rik-201ENSMUST00000054837 464 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccne1Q61457 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC17.23■□□□□ 0.35
Ccne1Q61457 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccne1Q61457 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Ccne1Q61457 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccne1Q61457 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ccne1Q61457 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccne1Q61457 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Ccne1Q61457 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccne1Q61457 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccne1Q61457 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Ccne1Q61457 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccne1Q61457 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Ccne1Q61457 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Ccne1Q61457 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Ccne1Q61457 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccne1Q61457 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccne1Q61457 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccne1Q61457 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC17.22■□□□□ 0.35
Ccne1Q61457 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Ccne1Q61457 AC159649.2-201ENSMUST00000222984 3223 ntBASIC17.22■□□□□ 0.35
Ccne1Q61457 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccne1Q61457 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccne1Q61457 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC17.22■□□□□ 0.35
Ccne1Q61457 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccne1Q61457 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC17.22■□□□□ 0.35
Ccne1Q61457 Gm12502-201ENSMUST00000120197 444 ntBASIC17.22■□□□□ 0.35
Ccne1Q61457 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccne1Q61457 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
Ccne1Q61457 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccne1Q61457 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Ccne1Q61457 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccne1Q61457 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccne1Q61457 Caly-203ENSMUST00000211044 1029 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ccne1Q61457 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC17.22■□□□□ 0.35
Ccne1Q61457 AC132317.1-201ENSMUST00000227227 962 ntBASIC17.22■□□□□ 0.35
Ccne1Q61457 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Ccne1Q61457 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC17.22■□□□□ 0.35
Ccne1Q61457 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccne1Q61457 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccne1Q61457 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Ccne1Q61457 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Ccne1Q61457 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccne1Q61457 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ccne1Q61457 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccne1Q61457 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Ccne1Q61457 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccne1Q61457 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccne1Q61457 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccne1Q61457 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccne1Q61457 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccne1Q61457 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccne1Q61457 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ccne1Q61457 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Ccne1Q61457 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccne1Q61457 Gm7993-201ENSMUST00000200970 1384 ntBASIC17.21■□□□□ 0.35
Ccne1Q61457 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC17.21■□□□□ 0.35
Ccne1Q61457 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Ccne1Q61457 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC17.21■□□□□ 0.35
Ccne1Q61457 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC17.21■□□□□ 0.35
Ccne1Q61457 CT573034.1-201ENSMUST00000222983 313 ntBASIC17.21■□□□□ 0.35
Ccne1Q61457 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccne1Q61457 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC17.21■□□□□ 0.35
Ccne1Q61457 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Ccne1Q61457 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ccne1Q61457 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccne1Q61457 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccne1Q61457 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccne1Q61457 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccne1Q61457 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ccne1Q61457 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.34
Ccne1Q61457 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Ccne1Q61457 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC17.21■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms