Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx2Q61412 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx2Q61412 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Vsx2Q61412 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx2Q61412 Cacna1b-203ENSMUST00000100348 7182 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Vsx2Q61412 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx2Q61412 Cd34-202ENSMUST00000110815 2554 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx2Q61412 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx2Q61412 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Vsx2Q61412 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx2Q61412 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx2Q61412 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx2Q61412 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx2Q61412 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Vsx2Q61412 Gm12490-201ENSMUST00000120255 560 ntBASIC13.01□□□□□ -0.33
Vsx2Q61412 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.01□□□□□ -0.33
Vsx2Q61412 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC13.01□□□□□ -0.33
Vsx2Q61412 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC13.01□□□□□ -0.33
Vsx2Q61412 Gm18307-201ENSMUST00000206864 949 ntBASIC13.01□□□□□ -0.33
Vsx2Q61412 Gm7653-201ENSMUST00000214567 508 ntBASIC13.01□□□□□ -0.33
Vsx2Q61412 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx2Q61412 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.01□□□□□ -0.33
Vsx2Q61412 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx2Q61412 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx2Q61412 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC13.01□□□□□ -0.33
Vsx2Q61412 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Vsx2Q61412 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx2Q61412 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.01□□□□□ -0.33
Vsx2Q61412 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx2Q61412 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx2Q61412 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Vsx2Q61412 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx2Q61412 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx2Q61412 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx2Q61412 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx2Q61412 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx2Q61412 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx2Q61412 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx2Q61412 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Vsx2Q61412 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx2Q61412 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Vsx2Q61412 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx2Q61412 Eif5-202ENSMUST00000166123 4050 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx2Q61412 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13□□□□□ -0.33
Vsx2Q61412 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vsx2Q61412 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx2Q61412 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx2Q61412 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx2Q61412 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vsx2Q61412 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13□□□□□ -0.33
Vsx2Q61412 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx2Q61412 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vsx2Q61412 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx2Q61412 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx2Q61412 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC13□□□□□ -0.33
Vsx2Q61412 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vsx2Q61412 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vsx2Q61412 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx2Q61412 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13□□□□□ -0.33
Vsx2Q61412 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx2Q61412 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13□□□□□ -0.33
Vsx2Q61412 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vsx2Q61412 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13□□□□□ -0.33
Vsx2Q61412 Gm11524-201ENSMUST00000119349 807 ntBASIC13□□□□□ -0.33
Vsx2Q61412 Gm5745-201ENSMUST00000183748 313 ntBASIC13□□□□□ -0.33
Vsx2Q61412 Gm5069-202ENSMUST00000192714 1011 ntBASIC13□□□□□ -0.33
Vsx2Q61412 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC13□□□□□ -0.33
Vsx2Q61412 Abhd18-205ENSMUST00000203472 588 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vsx2Q61412 Gm19078-201ENSMUST00000206311 727 ntBASIC13□□□□□ -0.33
Vsx2Q61412 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx2Q61412 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13□□□□□ -0.33
Vsx2Q61412 AC156560.2-201ENSMUST00000221232 264 ntBASIC13□□□□□ -0.33
Vsx2Q61412 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx2Q61412 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx2Q61412 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx2Q61412 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx2Q61412 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx2Q61412 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13□□□□□ -0.33
Vsx2Q61412 Gm37795-201ENSMUST00000194216 2459 ntBASIC13□□□□□ -0.33
Vsx2Q61412 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx2Q61412 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx2Q61412 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC13□□□□□ -0.33
Vsx2Q61412 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Vsx2Q61412 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx2Q61412 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx2Q61412 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx2Q61412 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Vsx2Q61412 AC139054.1-201ENSMUST00000226898 1598 ntBASIC12.99□□□□□ -0.33
Vsx2Q61412 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx2Q61412 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.99□□□□□ -0.33
Vsx2Q61412 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx2Q61412 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx2Q61412 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx2Q61412 Gm12485-201ENSMUST00000119641 291 ntBASIC12.99□□□□□ -0.33
Vsx2Q61412 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Vsx2Q61412 Gm7558-201ENSMUST00000193221 1165 ntBASIC12.99□□□□□ -0.33
Vsx2Q61412 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.99□□□□□ -0.33
Vsx2Q61412 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx2Q61412 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Vsx2Q61412 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms