Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.98■□□□□ 0.15
Vps54Q5SPW0 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Vps54Q5SPW0 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.98■□□□□ 0.15
Vps54Q5SPW0 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps54Q5SPW0 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vps54Q5SPW0 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
Vps54Q5SPW0 Gm6254-201ENSMUST00000168178 1072 ntBASIC15.98■□□□□ 0.15
Vps54Q5SPW0 Gm6153-201ENSMUST00000172004 1058 ntBASIC15.98■□□□□ 0.15
Vps54Q5SPW0 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
Vps54Q5SPW0 Mir7085-201ENSMUST00000184353 66 ntBASIC15.98■□□□□ 0.15
Vps54Q5SPW0 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.98■□□□□ 0.15
Vps54Q5SPW0 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.98■□□□□ 0.15
Vps54Q5SPW0 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vps54Q5SPW0 AC173210.1-201ENSMUST00000222341 1131 ntBASIC15.98■□□□□ 0.15
Vps54Q5SPW0 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps54Q5SPW0 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
Vps54Q5SPW0 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps54Q5SPW0 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Vps54Q5SPW0 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
Vps54Q5SPW0 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC15.98■□□□□ 0.15
Vps54Q5SPW0 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps54Q5SPW0 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps54Q5SPW0 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Vps54Q5SPW0 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vps54Q5SPW0 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps54Q5SPW0 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps54Q5SPW0 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps54Q5SPW0 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps54Q5SPW0 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps54Q5SPW0 Alas1-201ENSMUST00000074082 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps54Q5SPW0 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Vps54Q5SPW0 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vps54Q5SPW0 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps54Q5SPW0 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps54Q5SPW0 Gm16202-201ENSMUST00000117532 544 ntBASIC15.97■□□□□ 0.15
Vps54Q5SPW0 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Vps54Q5SPW0 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
Vps54Q5SPW0 Gm29705-201ENSMUST00000212598 474 ntBASIC15.97■□□□□ 0.15
Vps54Q5SPW0 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps54Q5SPW0 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps54Q5SPW0 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Vps54Q5SPW0 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
Vps54Q5SPW0 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps54Q5SPW0 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC15.97■□□□□ 0.15
Vps54Q5SPW0 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps54Q5SPW0 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vps54Q5SPW0 Acsl6-201ENSMUST00000000145 2297 ntTSL 5 BASIC15.97■□□□□ 0.15
Vps54Q5SPW0 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vps54Q5SPW0 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps54Q5SPW0 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC15.97■□□□□ 0.15
Vps54Q5SPW0 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
Vps54Q5SPW0 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Vps54Q5SPW0 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Vps54Q5SPW0 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps54Q5SPW0 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vps54Q5SPW0 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps54Q5SPW0 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Vps54Q5SPW0 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
Vps54Q5SPW0 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps54Q5SPW0 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Vps54Q5SPW0 Gm11618-201ENSMUST00000117946 267 ntBASIC15.96■□□□□ 0.15
Vps54Q5SPW0 Gm13123-201ENSMUST00000122173 492 ntBASIC15.96■□□□□ 0.15
Vps54Q5SPW0 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vps54Q5SPW0 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vps54Q5SPW0 1700094J05Rik-202ENSMUST00000190491 997 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Vps54Q5SPW0 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.96■□□□□ 0.15
Vps54Q5SPW0 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps54Q5SPW0 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Vps54Q5SPW0 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps54Q5SPW0 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Vps54Q5SPW0 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Vps54Q5SPW0 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Vps54Q5SPW0 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.96■□□□□ 0.14
Vps54Q5SPW0 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
Vps54Q5SPW0 Ankhd1-214ENSMUST00000155329 8223 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.14
Vps54Q5SPW0 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
Vps54Q5SPW0 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps54Q5SPW0 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Vps54Q5SPW0 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps54Q5SPW0 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps54Q5SPW0 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Vps54Q5SPW0 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps54Q5SPW0 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps54Q5SPW0 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps54Q5SPW0 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps54Q5SPW0 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Vps54Q5SPW0 Gm16177-201ENSMUST00000120728 718 ntBASIC15.95■□□□□ 0.14
Vps54Q5SPW0 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC15.95■□□□□ 0.14
Vps54Q5SPW0 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC15.95■□□□□ 0.14
Vps54Q5SPW0 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.95■□□□□ 0.14
Vps54Q5SPW0 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Vps54Q5SPW0 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC15.95■□□□□ 0.14
Vps54Q5SPW0 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.95■□□□□ 0.14
Vps54Q5SPW0 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC15.95■□□□□ 0.14
Vps54Q5SPW0 Gm9299-201ENSMUST00000206392 1140 ntBASIC15.95■□□□□ 0.14
Vps54Q5SPW0 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps54Q5SPW0 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps54Q5SPW0 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps54Q5SPW0 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
Vps54Q5SPW0 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 63.6 ms