Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 Mir8098-201ENSMUST00000184011 137 ntBASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Gm45167-201ENSMUST00000208007 322 ntBASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Fn1-201ENSMUST00000055226 8315 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Gja8-201ENSMUST00000062944 6940 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Cd163l1-203ENSMUST00000209398 3437 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Oit3-201ENSMUST00000009798 2717 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Gm5124-202ENSMUST00000132683 2083 ntBASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Adra1a-206ENSMUST00000225182 2337 ntBASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Gm34425-201ENSMUST00000216269 3079 ntTSL 5 BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Map3k4-201ENSMUST00000089058 5305 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Ccdc151-202ENSMUST00000115336 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Psd2-205ENSMUST00000176873 4375 ntAPPRIS ALT2 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Rab3c-202ENSMUST00000223922 2398 ntBASIC10□□□□□ -0.81
Trav3-3Q5R1C3 BC048403-201ENSMUST00000065600 3123 ntAPPRIS P1 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10□□□□□ -0.81
Trav3-3Q5R1C3 Kcnj5-203ENSMUST00000216033 2440 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Xkr8-201ENSMUST00000045550 4245 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Snx6-201ENSMUST00000005798 1928 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 AC122314.1-201ENSMUST00000223056 2239 ntBASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Fli1-201ENSMUST00000016231 3318 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Gm28036-202ENSMUST00000132494 5505 ntAPPRIS P5 TSL 2 BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Igsf9-202ENSMUST00000111235 4205 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Thrb-203ENSMUST00000091471 1758 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Gm1995-201ENSMUST00000220838 2602 ntBASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Spry2-201ENSMUST00000022709 2087 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Gm24589-201ENSMUST00000116692 94 ntBASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 AC161829.1-201ENSMUST00000220298 281 ntBASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Gm38187-201ENSMUST00000195609 4709 ntBASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Qrich1-202ENSMUST00000112155 3040 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Pcgf2-207ENSMUST00000179765 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Rbm10-207ENSMUST00000177738 2790 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Wscd1-201ENSMUST00000021168 2757 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Rbm10-201ENSMUST00000064911 2793 ntAPPRIS P3 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Lrp2-203ENSMUST00000100051 4359 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Fmo2-202ENSMUST00000111510 2260 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Wdfy2-201ENSMUST00000014691 6646 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Gm12020-201ENSMUST00000119030 2042 ntBASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Slc25a25-205ENSMUST00000113310 3278 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Opcml-201ENSMUST00000073822 2378 ntAPPRIS P1 TSL 5 BASIC9.99□□□□□ -0.81
Trav3-3Q5R1C3 Iqsec2-201ENSMUST00000096275 5252 ntAPPRIS P3 TSL 2 BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 AC025913.2-201ENSMUST00000220136 1766 ntBASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Ucp3-201ENSMUST00000032958 2448 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Rspo3-201ENSMUST00000092623 3085 ntAPPRIS P1 TSL 1 (best) BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Capn3-205ENSMUST00000110719 2778 ntTSL 5 BASIC9.98□□□□□ -0.81
Trav3-3Q5R1C3 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC9.98□□□□□ -0.81
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms