Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Gm45331-201ENSMUST00000209868 554 ntBASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Gm19309-201ENSMUST00000218295 205 ntBASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 CU024892.2-201ENSMUST00000224608 832 ntBASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Snora73a-201ENSMUST00000082453 205 ntBASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC15.38■□□□□ 0.05
Rc3h1Q4VGL6 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rc3h1Q4VGL6 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rc3h1Q4VGL6 Gm10729-202ENSMUST00000193403 1375 ntBASIC15.37■□□□□ 0.05
Rc3h1Q4VGL6 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Rc3h1Q4VGL6 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rc3h1Q4VGL6 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rc3h1Q4VGL6 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rc3h1Q4VGL6 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.37■□□□□ 0.05
Rc3h1Q4VGL6 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rc3h1Q4VGL6 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC15.37■□□□□ 0.05
Rc3h1Q4VGL6 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC15.37■□□□□ 0.05
Rc3h1Q4VGL6 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rc3h1Q4VGL6 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.37■□□□□ 0.05
Rc3h1Q4VGL6 Gm25261-201ENSMUST00000157416 134 ntBASIC15.37■□□□□ 0.05
Rc3h1Q4VGL6 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC15.37■□□□□ 0.05
Rc3h1Q4VGL6 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rc3h1Q4VGL6 Gm19184-201ENSMUST00000196798 928 ntBASIC15.37■□□□□ 0.05
Rc3h1Q4VGL6 Gm43930-201ENSMUST00000203868 845 ntBASIC15.37■□□□□ 0.05
Rc3h1Q4VGL6 Gm44974-201ENSMUST00000206387 1279 ntBASIC15.37■□□□□ 0.05
Rc3h1Q4VGL6 Gm32390-201ENSMUST00000212713 1172 ntBASIC15.37■□□□□ 0.05
Rc3h1Q4VGL6 Gm45880-201ENSMUST00000213041 853 ntBASIC15.37■□□□□ 0.05
Rc3h1Q4VGL6 Olfr707-201ENSMUST00000088687 924 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Rc3h1Q4VGL6 Olfr1532-ps1-201ENSMUST00000098140 924 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Rc3h1Q4VGL6 Gpr12-203ENSMUST00000197431 1455 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rc3h1Q4VGL6 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rc3h1Q4VGL6 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rc3h1Q4VGL6 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rc3h1Q4VGL6 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rc3h1Q4VGL6 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rc3h1Q4VGL6 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rc3h1Q4VGL6 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 Gm16479-201ENSMUST00000121706 932 ntBASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 Gm28196-201ENSMUST00000187719 640 ntBASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 Gm17823-201ENSMUST00000217830 1006 ntBASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 Gm8399-201ENSMUST00000082300 1117 ntBASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rc3h1Q4VGL6 Saxo1-201ENSMUST00000030216 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Art3-206ENSMUST00000120416 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Gm6161-201ENSMUST00000121942 1102 ntBASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Gm11978-201ENSMUST00000122315 466 ntBASIC15.35■□□□□ 0.05
Rc3h1Q4VGL6 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 54 ms