Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim40Q3UWA4 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim40Q3UWA4 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trim40Q3UWA4 Gm14494-201ENSMUST00000118786 435 ntBASIC12.49□□□□□ -0.41
Trim40Q3UWA4 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.49□□□□□ -0.41
Trim40Q3UWA4 Gm6222-201ENSMUST00000120787 396 ntBASIC12.49□□□□□ -0.41
Trim40Q3UWA4 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC12.49□□□□□ -0.41
Trim40Q3UWA4 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim40Q3UWA4 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.49□□□□□ -0.41
Trim40Q3UWA4 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.49□□□□□ -0.41
Trim40Q3UWA4 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.49□□□□□ -0.41
Trim40Q3UWA4 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.49□□□□□ -0.41
Trim40Q3UWA4 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim40Q3UWA4 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Trim40Q3UWA4 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trim40Q3UWA4 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Trim40Q3UWA4 Matn2-203ENSMUST00000226766 3252 ntBASIC12.49□□□□□ -0.41
Trim40Q3UWA4 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim40Q3UWA4 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Trim40Q3UWA4 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim40Q3UWA4 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim40Q3UWA4 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim40Q3UWA4 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim40Q3UWA4 Bmp7-201ENSMUST00000009143 3670 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim40Q3UWA4 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trim40Q3UWA4 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Gm16564-201ENSMUST00000162545 3010 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Cd247-201ENSMUST00000005907 1632 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Oaz2-ps-201ENSMUST00000121735 537 ntBASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Cpt1c-206ENSMUST00000212836 2716 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 4921507P07Rik-201ENSMUST00000031852 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Nxf1-201ENSMUST00000010241 2326 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Dll1-201ENSMUST00000014917 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Trim40Q3UWA4 Pde4d-220ENSMUST00000177907 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim40Q3UWA4 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim40Q3UWA4 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trim40Q3UWA4 Abcc6-201ENSMUST00000002850 4974 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim40Q3UWA4 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim40Q3UWA4 Trim26-205ENSMUST00000130367 3187 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Trim40Q3UWA4 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim40Q3UWA4 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim40Q3UWA4 Anapc7-202ENSMUST00000119792 3599 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim40Q3UWA4 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trim40Q3UWA4 Sorbs3-202ENSMUST00000227259 2481 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Trim40Q3UWA4 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim40Q3UWA4 Gm6018-201ENSMUST00000216090 1306 ntBASIC12.47□□□□□ -0.41
Trim40Q3UWA4 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim40Q3UWA4 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim40Q3UWA4 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.47□□□□□ -0.41
Trim40Q3UWA4 Gm4913-201ENSMUST00000117075 1290 ntBASIC12.47□□□□□ -0.41
Trim40Q3UWA4 Gm11779-201ENSMUST00000118541 368 ntBASIC12.47□□□□□ -0.41
Trim40Q3UWA4 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC12.47□□□□□ -0.41
Trim40Q3UWA4 AC131997.1-201ENSMUST00000228611 1229 ntBASIC12.47□□□□□ -0.41
Trim40Q3UWA4 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim40Q3UWA4 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trim40Q3UWA4 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trim40Q3UWA4 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim40Q3UWA4 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trim40Q3UWA4 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.47□□□□□ -0.41
Trim40Q3UWA4 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Trim40Q3UWA4 Gm43273-201ENSMUST00000199649 2594 ntBASIC12.47□□□□□ -0.41
Trim40Q3UWA4 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC12.47□□□□□ -0.41
Trim40Q3UWA4 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 86.8 ms