Protein–RNA interactions for Protein: Q3UP24

Nlrc4, NLR family CARD domain-containing protein 4, mousemouse

Predictions only

Length 1,024 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nlrc4Q3UP24 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Cpsf4l-203ENSMUST00000106617 1123 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Gm11814-201ENSMUST00000119515 929 ntBASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Gm8602-201ENSMUST00000184045 607 ntBASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Gm27839-201ENSMUST00000184242 106 ntBASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Gm44064-201ENSMUST00000204964 1087 ntBASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Akr1b7-201ENSMUST00000007449 1281 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Nlrc4Q3UP24 Ksr1-207ENSMUST00000226282 5260 ntBASIC14.02□□□□□ -0.16
Nlrc4Q3UP24 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC14.02□□□□□ -0.16
Nlrc4Q3UP24 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nlrc4Q3UP24 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nlrc4Q3UP24 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nlrc4Q3UP24 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nlrc4Q3UP24 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Nlrc4Q3UP24 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nlrc4Q3UP24 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nlrc4Q3UP24 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nlrc4Q3UP24 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nlrc4Q3UP24 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Nlrc4Q3UP24 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.02□□□□□ -0.16
Nlrc4Q3UP24 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nlrc4Q3UP24 Aqp8-201ENSMUST00000033023 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Nlrc4Q3UP24 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC14.02□□□□□ -0.16
Nlrc4Q3UP24 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.02□□□□□ -0.17
Nlrc4Q3UP24 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nlrc4Q3UP24 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nlrc4Q3UP24 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nlrc4Q3UP24 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nlrc4Q3UP24 Ccdc70-201ENSMUST00000017193 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nlrc4Q3UP24 Gm24196-201ENSMUST00000179161 110 ntBASIC14.02□□□□□ -0.17
Nlrc4Q3UP24 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
Nlrc4Q3UP24 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.02□□□□□ -0.17
Nlrc4Q3UP24 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC14.02□□□□□ -0.17
Nlrc4Q3UP24 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nlrc4Q3UP24 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nlrc4Q3UP24 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
Nlrc4Q3UP24 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nlrc4Q3UP24 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nlrc4Q3UP24 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nlrc4Q3UP24 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nlrc4Q3UP24 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nlrc4Q3UP24 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nlrc4Q3UP24 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nlrc4Q3UP24 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nlrc4Q3UP24 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nlrc4Q3UP24 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nlrc4Q3UP24 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Nlrc4Q3UP24 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Nlrc4Q3UP24 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nlrc4Q3UP24 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nlrc4Q3UP24 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Nlrc4Q3UP24 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.02□□□□□ -0.17
Nlrc4Q3UP24 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nlrc4Q3UP24 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.01□□□□□ -0.17
Nlrc4Q3UP24 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nlrc4Q3UP24 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nlrc4Q3UP24 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Nlrc4Q3UP24 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nlrc4Q3UP24 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC14.01□□□□□ -0.17
Nlrc4Q3UP24 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nlrc4Q3UP24 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nlrc4Q3UP24 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nlrc4Q3UP24 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Nlrc4Q3UP24 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nlrc4Q3UP24 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nlrc4Q3UP24 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nlrc4Q3UP24 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nlrc4Q3UP24 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Nlrc4Q3UP24 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Nlrc4Q3UP24 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms