Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Gm13812-201ENSMUST00000118061 1347 ntBASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Gm13810-201ENSMUST00000118584 1347 ntBASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Gm38157-201ENSMUST00000194178 1698 ntBASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Rnf141-207ENSMUST00000176716 1080 ntTSL 2 BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 2310074N15Rik-201ENSMUST00000198276 582 ntBASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Gm2517-201ENSMUST00000215651 348 ntBASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Gm7278-201ENSMUST00000119836 1401 ntBASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Haspin-201ENSMUST00000052140 2810 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 CT009713.10-201ENSMUST00000225013 1986 ntBASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 5730416F02Rik-201ENSMUST00000120648 812 ntBASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Mir7076-201ENSMUST00000183519 74 ntBASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Gm18204-201ENSMUST00000209835 793 ntBASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Gm8768-201ENSMUST00000220020 826 ntBASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Gm14005-208ENSMUST00000223654 681 ntBASIC12.16□□□□□ -0.46
Spg11Q3UHA3 AC159205.5-202ENSMUST00000224849 386 ntBASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Aamdc-202ENSMUST00000072725 776 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Spg11Q3UHA3 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Spg11Q3UHA3 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Spg11Q3UHA3 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Spg11Q3UHA3 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Spg11Q3UHA3 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Spg11Q3UHA3 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC12.15□□□□□ -0.46
Spg11Q3UHA3 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Spg11Q3UHA3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Spg11Q3UHA3 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Spg11Q3UHA3 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Spg11Q3UHA3 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Spg11Q3UHA3 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Spg11Q3UHA3 Gm15573-201ENSMUST00000119487 540 ntBASIC12.15□□□□□ -0.46
Spg11Q3UHA3 Tepp-207ENSMUST00000212056 613 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
Spg11Q3UHA3 Gm25201-201ENSMUST00000083093 170 ntBASIC12.15□□□□□ -0.46
Spg11Q3UHA3 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Spg11Q3UHA3 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.15□□□□□ -0.46
Spg11Q3UHA3 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Spg11Q3UHA3 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Spg11Q3UHA3 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Spg11Q3UHA3 Gm12766-201ENSMUST00000140298 1823 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Spg11Q3UHA3 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Spg11Q3UHA3 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Spg11Q3UHA3 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Spg11Q3UHA3 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Spg11Q3UHA3 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Spg11Q3UHA3 4930453L07Rik-201ENSMUST00000209053 1439 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Spg11Q3UHA3 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.15□□□□□ -0.47
Spg11Q3UHA3 Camk1d-202ENSMUST00000114987 1295 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Spg11Q3UHA3 Gm11451-201ENSMUST00000118946 630 ntBASIC12.15□□□□□ -0.47
Spg11Q3UHA3 Rdh9-203ENSMUST00000136223 1276 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
Spg11Q3UHA3 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC12.15□□□□□ -0.47
Spg11Q3UHA3 Aprt-ps-201ENSMUST00000212311 505 ntBASIC12.15□□□□□ -0.47
Spg11Q3UHA3 Acy1-209ENSMUST00000215395 1051 ntTSL 5 BASIC12.15□□□□□ -0.47
Spg11Q3UHA3 Acy1-211ENSMUST00000216400 1030 ntTSL 5 BASIC12.15□□□□□ -0.47
Spg11Q3UHA3 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
Spg11Q3UHA3 Ifnab-201ENSMUST00000071378 1058 ntAPPRIS P1 BASIC12.15□□□□□ -0.47
Spg11Q3UHA3 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
Spg11Q3UHA3 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.14□□□□□ -0.47
Spg11Q3UHA3 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Spg11Q3UHA3 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Spg11Q3UHA3 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Spg11Q3UHA3 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Spg11Q3UHA3 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Spg11Q3UHA3 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Spg11Q3UHA3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Spg11Q3UHA3 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Spg11Q3UHA3 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Spg11Q3UHA3 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Spg11Q3UHA3 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms