Protein–RNA interactions for Protein: Q3U1D9

UPF0602 protein C4orf47 homolog, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q3U1D9 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC11.57□□□□□ -0.56
Q3U1D9 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Q3U1D9 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Q3U1D9 Dcdc2b-203ENSMUST00000179209 864 ntAPPRIS P1 TSL 5 BASIC11.57□□□□□ -0.56
Q3U1D9 Gm27514-201ENSMUST00000183692 110 ntBASIC11.57□□□□□ -0.56
Q3U1D9 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC11.57□□□□□ -0.56
Q3U1D9 Gm44069-201ENSMUST00000204898 506 ntBASIC11.57□□□□□ -0.56
Q3U1D9 Gm36198-201ENSMUST00000217490 416 ntTSL 3 BASIC11.57□□□□□ -0.56
Q3U1D9 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Q3U1D9 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Q3U1D9 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Q3U1D9 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Q3U1D9 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Q3U1D9 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Q3U1D9 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Q3U1D9 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC11.57□□□□□ -0.56
Q3U1D9 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Q3U1D9 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Q3U1D9 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Q3U1D9 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Q3U1D9 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Q3U1D9 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC11.57□□□□□ -0.56
Q3U1D9 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Q3U1D9 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Q3U1D9 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Q3U1D9 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Q3U1D9 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Q3U1D9 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC11.56□□□□□ -0.56
Q3U1D9 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC11.56□□□□□ -0.56
Q3U1D9 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 2900097C17Rik-202ENSMUST00000192863 4915 ntBASIC11.56□□□□□ -0.56
Q3U1D9 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC11.56□□□□□ -0.56
Q3U1D9 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC11.56□□□□□ -0.56
Q3U1D9 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC11.56□□□□□ -0.56
Q3U1D9 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC11.56□□□□□ -0.56
Q3U1D9 Gm26871-201ENSMUST00000180593 700 ntTSL 3 BASIC11.56□□□□□ -0.56
Q3U1D9 Gm42693-201ENSMUST00000196779 631 ntBASIC11.56□□□□□ -0.56
Q3U1D9 Gm6007-201ENSMUST00000208170 823 ntBASIC11.56□□□□□ -0.56
Q3U1D9 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.56□□□□□ -0.56
Q3U1D9 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.56□□□□□ -0.56
Q3U1D9 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC11.56□□□□□ -0.56
Q3U1D9 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC11.56□□□□□ -0.56
Q3U1D9 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Q3U1D9 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC11.56□□□□□ -0.56
Q3U1D9 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC11.56□□□□□ -0.56
Q3U1D9 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.56□□□□□ -0.56
Q3U1D9 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC11.56□□□□□ -0.56
Q3U1D9 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC11.56□□□□□ -0.56
Q3U1D9 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Q3U1D9 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Q3U1D9 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Q3U1D9 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Q3U1D9 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Q3U1D9 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
Q3U1D9 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Q3U1D9 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
Q3U1D9 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Q3U1D9 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
Q3U1D9 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Q3U1D9 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Q3U1D9 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Q3U1D9 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Q3U1D9 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Q3U1D9 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.55□□□□□ -0.56
Q3U1D9 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
Q3U1D9 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC11.55□□□□□ -0.56
Q3U1D9 Wfdc9-202ENSMUST00000109335 547 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
Q3U1D9 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC11.55□□□□□ -0.56
Q3U1D9 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
Q3U1D9 Gm6447-201ENSMUST00000118905 835 ntBASIC11.55□□□□□ -0.56
Q3U1D9 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms