Protein–RNA interactions for Protein: Q3MI99

Ccbe1, Collagen and calcium-binding EGF domain-containing protein 1, mousemouse

Predictions only

Length 408 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccbe1Q3MI99 Gm13437-201ENSMUST00000122434 1981 ntBASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Ufd1-201ENSMUST00000005394 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Gm37391-201ENSMUST00000194891 2318 ntBASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Gm44806-201ENSMUST00000205574 2303 ntBASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 BC055324-202ENSMUST00000097493 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Ccdc187-201ENSMUST00000057224 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Tinf2-201ENSMUST00000007733 2956 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Arl13b-201ENSMUST00000089289 3528 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Klhl22-208ENSMUST00000165790 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Mirt1-203ENSMUST00000181539 2259 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Ccbe1Q3MI99 Zfp526-201ENSMUST00000055604 3380 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Sipa1l2-204ENSMUST00000212987 6690 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Eya2-201ENSMUST00000063433 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Kalrn-210ENSMUST00000114964 2693 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 AC164441.2-201ENSMUST00000220818 2746 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Csk-204ENSMUST00000215396 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Gimap8-202ENSMUST00000203083 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Nars2-201ENSMUST00000044466 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Rdh19-201ENSMUST00000077530 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Gm5989-201ENSMUST00000096092 2077 ntBASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 AC122860.2-201ENSMUST00000217967 2671 ntBASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Ap5b1-201ENSMUST00000096318 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Cldn15-202ENSMUST00000111093 1902 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Vamp1-203ENSMUST00000100942 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Mindy1-202ENSMUST00000107187 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Ccbe1Q3MI99 Lta4h-201ENSMUST00000016033 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Sf1-208ENSMUST00000131252 4353 ntAPPRIS P4 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Uspl1-205ENSMUST00000121416 3792 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Rabif-201ENSMUST00000047978 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Otop1-201ENSMUST00000063136 3106 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Gm25990-201ENSMUST00000102440 86 ntBASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Gm12882-201ENSMUST00000121696 517 ntBASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 CT943659.1-201ENSMUST00000215459 326 ntBASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Psmb5-202ENSMUST00000227257 622 ntBASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Ccbe1Q3MI99 St14-201ENSMUST00000034478 3259 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms