Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Adamts10-201ENSMUST00000087623 4043 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Ddx54-201ENSMUST00000031598 4322 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 AC122314.1-201ENSMUST00000223056 2239 ntBASIC10.93□□□□□ -0.66
Trim63Q38HM4 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Nsl1-202ENSMUST00000078259 4879 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Gon4l-203ENSMUST00000107498 7537 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Siglec1-203ENSMUST00000110227 5790 ntAPPRIS ALT2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Ttll7-205ENSMUST00000170055 6075 ntAPPRIS ALT2 TSL 5 BASIC10.93□□□□□ -0.66
Trim63Q38HM4 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Nol6-201ENSMUST00000030138 4599 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim63Q38HM4 AC151895.1-201ENSMUST00000219025 1742 ntBASIC10.92□□□□□ -0.66
Trim63Q38HM4 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Prc1-206ENSMUST00000173824 2912 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Sp6-201ENSMUST00000047997 3546 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Htr1b-202ENSMUST00000183482 4724 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Kalrn-202ENSMUST00000089655 6506 ntTSL 5 BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Fhl1-204ENSMUST00000114772 2283 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Nup210-201ENSMUST00000032179 7037 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Mon2-201ENSMUST00000037557 5511 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim63Q38HM4 AC115735.4-201ENSMUST00000227460 1944 ntBASIC10.92□□□□□ -0.66
Trim63Q38HM4 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim63Q38HM4 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Helq-201ENSMUST00000044684 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Uap1l1-201ENSMUST00000102925 3349 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Ccdc154-203ENSMUST00000182621 2402 ntAPPRIS P2 TSL 5 BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Gm715-201ENSMUST00000117865 831 ntBASIC10.92□□□□□ -0.66
Trim63Q38HM4 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Mir1668-201ENSMUST00000184114 107 ntBASIC10.92□□□□□ -0.66
Trim63Q38HM4 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Sec14l4-201ENSMUST00000019512 2956 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Dysf-211ENSMUST00000168387 6501 ntTSL 5 BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Gm44851-201ENSMUST00000205735 2309 ntBASIC10.92□□□□□ -0.66
Trim63Q38HM4 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Rtn4-202ENSMUST00000078830 3615 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trim63Q38HM4 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Mdh1b-201ENSMUST00000114094 1719 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Gm45449-201ENSMUST00000211485 1960 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC10.92□□□□□ -0.66
Trim63Q38HM4 Slc6a2-201ENSMUST00000072939 6187 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Foxp1-205ENSMUST00000113324 2121 ntTSL 5 BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Foxp1-207ENSMUST00000113328 2121 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Adgrl3-210ENSMUST00000119788 5394 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Clpx-201ENSMUST00000015501 2885 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Foxp1-228ENSMUST00000177307 2121 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Vsig10l-201ENSMUST00000107977 3836 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC10.91□□□□□ -0.66
Trim63Q38HM4 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 4930519G04Rik-201ENSMUST00000031547 2092 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Rfx1-201ENSMUST00000005600 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Zfp236-202ENSMUST00000182122 6059 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC10.91□□□□□ -0.66
Trim63Q38HM4 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC10.91□□□□□ -0.66
Trim63Q38HM4 Gm44799-201ENSMUST00000207639 1202 ntBASIC10.91□□□□□ -0.66
Trim63Q38HM4 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Armc5-201ENSMUST00000044660 3834 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Hdac5-204ENSMUST00000107152 3788 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 2010315B03Rik-202ENSMUST00000177714 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Osbp2-203ENSMUST00000102950 3077 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Fads1-201ENSMUST00000010807 3456 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Plekha6-204ENSMUST00000187285 5040 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
Trim63Q38HM4 Gm26584-201ENSMUST00000180551 3216 ntTSL 5 BASIC10.91□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms