Protein–RNA interactions for Protein: Q07643

Col9a2, Collagen alpha-2(IX) chain, mousemouse

Predictions only

Length 688 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a2Q07643 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a2Q07643 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a2Q07643 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a2Q07643 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Col9a2Q07643 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Col9a2Q07643 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC14.42□□□□□ -0.1
Col9a2Q07643 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a2Q07643 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a2Q07643 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a2Q07643 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC14.42□□□□□ -0.1
Col9a2Q07643 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Col9a2Q07643 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a2Q07643 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a2Q07643 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Col9a2Q07643 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a2Q07643 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a2Q07643 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a2Q07643 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a2Q07643 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a2Q07643 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a2Q07643 Gm9431-201ENSMUST00000119765 1051 ntBASIC14.41□□□□□ -0.1
Col9a2Q07643 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC14.41□□□□□ -0.1
Col9a2Q07643 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a2Q07643 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Col9a2Q07643 Gm7809-201ENSMUST00000153199 742 ntBASIC14.41□□□□□ -0.1
Col9a2Q07643 AC173210.1-201ENSMUST00000222341 1131 ntBASIC14.41□□□□□ -0.1
Col9a2Q07643 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a2Q07643 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC14.41□□□□□ -0.1
Col9a2Q07643 Gm16372-201ENSMUST00000073088 450 ntBASIC14.41□□□□□ -0.1
Col9a2Q07643 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Col9a2Q07643 Gm24526-201ENSMUST00000082921 158 ntBASIC14.41□□□□□ -0.1
Col9a2Q07643 Gm18222-201ENSMUST00000202416 1387 ntBASIC14.41□□□□□ -0.1
Col9a2Q07643 Taldo1-204ENSMUST00000211654 1362 ntTSL 5 BASIC14.41□□□□□ -0.1
Col9a2Q07643 AC122371.1-201ENSMUST00000220876 1477 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a2Q07643 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a2Q07643 CT009713.10-201ENSMUST00000225013 1986 ntBASIC14.41□□□□□ -0.1
Col9a2Q07643 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a2Q07643 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Col9a2Q07643 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.41□□□□□ -0.1
Col9a2Q07643 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a2Q07643 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Col9a2Q07643 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a2Q07643 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Col9a2Q07643 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a2Q07643 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a2Q07643 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a2Q07643 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Col9a2Q07643 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a2Q07643 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC14.4□□□□□ -0.1
Col9a2Q07643 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a2Q07643 Rcan2-202ENSMUST00000044895 3363 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a2Q07643 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a2Q07643 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Col9a2Q07643 AC122314.1-201ENSMUST00000223056 2239 ntBASIC14.4□□□□□ -0.1
Col9a2Q07643 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a2Q07643 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC14.4□□□□□ -0.1
Col9a2Q07643 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Col9a2Q07643 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC14.4□□□□□ -0.1
Col9a2Q07643 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a2Q07643 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC14.4□□□□□ -0.1
Col9a2Q07643 Gm32025-201ENSMUST00000217960 307 ntBASIC14.4□□□□□ -0.1
Col9a2Q07643 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a2Q07643 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a2Q07643 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Col9a2Q07643 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a2Q07643 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Col9a2Q07643 Ngly1-207ENSMUST00000224656 2329 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.11
Col9a2Q07643 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a2Q07643 Ano6-208ENSMUST00000227791 3149 ntAPPRIS ALT2 BASIC14.39□□□□□ -0.11
Col9a2Q07643 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a2Q07643 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a2Q07643 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a2Q07643 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.39□□□□□ -0.11
Col9a2Q07643 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a2Q07643 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a2Q07643 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a2Q07643 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a2Q07643 Snord83b-201ENSMUST00000104546 94 ntBASIC14.39□□□□□ -0.11
Col9a2Q07643 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a2Q07643 Gm11793-201ENSMUST00000120433 981 ntBASIC14.39□□□□□ -0.11
Col9a2Q07643 Gm12329-201ENSMUST00000120829 1007 ntBASIC14.39□□□□□ -0.11
Col9a2Q07643 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC14.39□□□□□ -0.11
Col9a2Q07643 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC14.39□□□□□ -0.11
Col9a2Q07643 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC14.39□□□□□ -0.11
Col9a2Q07643 Gm6334-201ENSMUST00000207083 228 ntBASIC14.39□□□□□ -0.11
Col9a2Q07643 AC166051.1-201ENSMUST00000214313 210 ntBASIC14.39□□□□□ -0.11
Col9a2Q07643 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC14.39□□□□□ -0.11
Col9a2Q07643 Gm4935-201ENSMUST00000221316 1198 ntBASIC14.39□□□□□ -0.11
Col9a2Q07643 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a2Q07643 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Col9a2Q07643 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Col9a2Q07643 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Col9a2Q07643 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a2Q07643 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a2Q07643 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a2Q07643 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a2Q07643 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Col9a2Q07643 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a2Q07643 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Col9a2Q07643 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms