Protein–RNA interactions for Protein: Q05895

Thbs3, Thrombospondin-3, mousemouse

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs3Q05895 Gm9115-201ENSMUST00000120192 1348 ntBASIC11.71□□□□□ -0.53
Thbs3Q05895 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.71□□□□□ -0.53
Thbs3Q05895 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Thbs3Q05895 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Thbs3Q05895 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Thbs3Q05895 Gm11400-201ENSMUST00000120853 1214 ntBASIC11.71□□□□□ -0.53
Thbs3Q05895 Ighv5-13-201ENSMUST00000193550 290 ntBASIC11.71□□□□□ -0.53
Thbs3Q05895 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Thbs3Q05895 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC11.71□□□□□ -0.53
Thbs3Q05895 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Thbs3Q05895 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Thbs3Q05895 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Thbs3Q05895 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Thbs3Q05895 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Thbs3Q05895 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Thbs3Q05895 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Thbs3Q05895 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Thbs3Q05895 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.54
Thbs3Q05895 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Thbs3Q05895 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Thbs3Q05895 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs3Q05895 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs3Q05895 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.7□□□□□ -0.54
Thbs3Q05895 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.7□□□□□ -0.54
Thbs3Q05895 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs3Q05895 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs3Q05895 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC11.7□□□□□ -0.54
Thbs3Q05895 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC11.7□□□□□ -0.54
Thbs3Q05895 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC11.7□□□□□ -0.54
Thbs3Q05895 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.7□□□□□ -0.54
Thbs3Q05895 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs3Q05895 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs3Q05895 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs3Q05895 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs3Q05895 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs3Q05895 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs3Q05895 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs3Q05895 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs3Q05895 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC11.7□□□□□ -0.54
Thbs3Q05895 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Thbs3Q05895 Gm14928-201ENSMUST00000120198 477 ntBASIC11.7□□□□□ -0.54
Thbs3Q05895 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC11.7□□□□□ -0.54
Thbs3Q05895 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC11.7□□□□□ -0.54
Thbs3Q05895 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC11.7□□□□□ -0.54
Thbs3Q05895 Gm23984-201ENSMUST00000157139 203 ntBASIC11.7□□□□□ -0.54
Thbs3Q05895 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC11.7□□□□□ -0.54
Thbs3Q05895 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs3Q05895 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Thbs3Q05895 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs3Q05895 Mir7221-201ENSMUST00000184009 72 ntBASIC11.7□□□□□ -0.54
Thbs3Q05895 Poc1a-205ENSMUST00000191434 1242 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs3Q05895 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC11.7□□□□□ -0.54
Thbs3Q05895 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs3Q05895 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.7□□□□□ -0.54
Thbs3Q05895 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs3Q05895 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs3Q05895 Swi5-201ENSMUST00000050410 775 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs3Q05895 Gm6180-201ENSMUST00000065243 498 ntBASIC11.7□□□□□ -0.54
Thbs3Q05895 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs3Q05895 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.7□□□□□ -0.54
Thbs3Q05895 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs3Q05895 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
Thbs3Q05895 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Thbs3Q05895 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs3Q05895 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs3Q05895 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs3Q05895 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Thbs3Q05895 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Thbs3Q05895 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs3Q05895 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC11.7□□□□□ -0.54
Thbs3Q05895 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs3Q05895 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Thbs3Q05895 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Thbs3Q05895 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Thbs3Q05895 Serpinb6d-201ENSMUST00000059637 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs3Q05895 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Thbs3Q05895 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Thbs3Q05895 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs3Q05895 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs3Q05895 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.69□□□□□ -0.54
Thbs3Q05895 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs3Q05895 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs3Q05895 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs3Q05895 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs3Q05895 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs3Q05895 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs3Q05895 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs3Q05895 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs3Q05895 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs3Q05895 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs3Q05895 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC11.69□□□□□ -0.54
Thbs3Q05895 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs3Q05895 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Thbs3Q05895 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC11.69□□□□□ -0.54
Thbs3Q05895 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC11.69□□□□□ -0.54
Thbs3Q05895 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC11.69□□□□□ -0.54
Thbs3Q05895 Gm28911-201ENSMUST00000188837 117 ntBASIC11.69□□□□□ -0.54
Thbs3Q05895 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC11.69□□□□□ -0.54
Thbs3Q05895 Gm6745-201ENSMUST00000199216 526 ntBASIC11.69□□□□□ -0.54
Thbs3Q05895 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 71.6 ms