Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sox9Q04887 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox9Q04887 Gm11930-201ENSMUST00000117788 190 ntBASIC13.74□□□□□ -0.21
Sox9Q04887 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox9Q04887 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox9Q04887 Gm44645-201ENSMUST00000205492 1653 ntBASIC13.74□□□□□ -0.21
Sox9Q04887 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Sox9Q04887 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox9Q04887 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox9Q04887 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox9Q04887 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Sox9Q04887 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox9Q04887 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox9Q04887 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Sox9Q04887 Gm5884-201ENSMUST00000036712 1479 ntBASIC13.74□□□□□ -0.21
Sox9Q04887 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox9Q04887 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox9Q04887 CU062626.3-201ENSMUST00000225522 1411 ntBASIC13.73□□□□□ -0.21
Sox9Q04887 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox9Q04887 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox9Q04887 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Sox9Q04887 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.73□□□□□ -0.21
Sox9Q04887 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.73□□□□□ -0.21
Sox9Q04887 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox9Q04887 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox9Q04887 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox9Q04887 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox9Q04887 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox9Q04887 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Sox9Q04887 Prss43-201ENSMUST00000077549 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox9Q04887 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC13.73□□□□□ -0.21
Sox9Q04887 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox9Q04887 Slc38a11-201ENSMUST00000112420 1606 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox9Q04887 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox9Q04887 Gm23200-201ENSMUST00000104379 132 ntBASIC13.73□□□□□ -0.21
Sox9Q04887 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.73□□□□□ -0.21
Sox9Q04887 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.73□□□□□ -0.21
Sox9Q04887 Pom121l12-201ENSMUST00000117584 1039 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Sox9Q04887 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Sox9Q04887 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox9Q04887 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Sox9Q04887 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Sox9Q04887 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Sox9Q04887 Gm8584-201ENSMUST00000171982 758 ntBASIC13.73□□□□□ -0.21
Sox9Q04887 Gm27046-201ENSMUST00000182160 463 ntBASIC13.73□□□□□ -0.21
Sox9Q04887 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.73□□□□□ -0.21
Sox9Q04887 Gm5896-201ENSMUST00000189662 1024 ntBASIC13.73□□□□□ -0.21
Sox9Q04887 D530033B14Rik-202ENSMUST00000206282 216 ntBASIC13.73□□□□□ -0.21
Sox9Q04887 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Sox9Q04887 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Sox9Q04887 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox9Q04887 AC162938.1-201ENSMUST00000213140 2323 ntBASIC13.73□□□□□ -0.21
Sox9Q04887 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox9Q04887 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Sox9Q04887 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Sox9Q04887 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Sox9Q04887 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC13.72□□□□□ -0.21
Sox9Q04887 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox9Q04887 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox9Q04887 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox9Q04887 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.72□□□□□ -0.21
Sox9Q04887 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox9Q04887 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox9Q04887 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox9Q04887 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox9Q04887 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox9Q04887 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC13.72□□□□□ -0.21
Sox9Q04887 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.72□□□□□ -0.21
Sox9Q04887 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Sox9Q04887 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Sox9Q04887 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox9Q04887 Prdx1-202ENSMUST00000106470 877 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Sox9Q04887 Gm13611-201ENSMUST00000118269 318 ntBASIC13.72□□□□□ -0.21
Sox9Q04887 Gm11961-202ENSMUST00000141157 760 ntTSL 3 BASIC13.72□□□□□ -0.21
Sox9Q04887 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Sox9Q04887 Gm5051-201ENSMUST00000204085 485 ntBASIC13.72□□□□□ -0.21
Sox9Q04887 Gm44262-201ENSMUST00000204969 372 ntBASIC13.72□□□□□ -0.21
Sox9Q04887 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox9Q04887 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox9Q04887 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox9Q04887 Il17c-201ENSMUST00000050963 719 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox9Q04887 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox9Q04887 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox9Q04887 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox9Q04887 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Sox9Q04887 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox9Q04887 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Sox9Q04887 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Sox9Q04887 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox9Q04887 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox9Q04887 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox9Q04887 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.72□□□□□ -0.21
Sox9Q04887 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Sox9Q04887 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC13.72□□□□□ -0.21
Sox9Q04887 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox9Q04887 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Sox9Q04887 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox9Q04887 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Sox9Q04887 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Sox9Q04887 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms