Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Gm21896-201ENSMUST00000186520 696 ntBASIC11.18□□□□□ -0.62
Npas1P97459 Gm21873-201ENSMUST00000186728 696 ntBASIC11.18□□□□□ -0.62
Npas1P97459 Gm21794-201ENSMUST00000187056 696 ntBASIC11.18□□□□□ -0.62
Npas1P97459 Gm21880-201ENSMUST00000187275 696 ntBASIC11.18□□□□□ -0.62
Npas1P97459 Gm21826-201ENSMUST00000187451 696 ntBASIC11.18□□□□□ -0.62
Npas1P97459 Gm21198-201ENSMUST00000188393 696 ntBASIC11.18□□□□□ -0.62
Npas1P97459 Gm21749-201ENSMUST00000189343 696 ntBASIC11.18□□□□□ -0.62
Npas1P97459 Gm21901-201ENSMUST00000189568 696 ntBASIC11.18□□□□□ -0.62
Npas1P97459 Gm29424-201ENSMUST00000189716 696 ntBASIC11.18□□□□□ -0.62
Npas1P97459 Gm28599-201ENSMUST00000189838 694 ntBASIC11.18□□□□□ -0.62
Npas1P97459 Gm21867-201ENSMUST00000189917 696 ntBASIC11.18□□□□□ -0.62
Npas1P97459 Gm29269-201ENSMUST00000190087 696 ntBASIC11.18□□□□□ -0.62
Npas1P97459 Gm21722-201ENSMUST00000190153 696 ntBASIC11.18□□□□□ -0.62
Npas1P97459 Gm28423-201ENSMUST00000190701 696 ntBASIC11.18□□□□□ -0.62
Npas1P97459 Gm21899-201ENSMUST00000190745 696 ntBASIC11.18□□□□□ -0.62
Npas1P97459 Gm21910-201ENSMUST00000191163 696 ntBASIC11.18□□□□□ -0.62
Npas1P97459 Gm21849-201ENSMUST00000191571 696 ntBASIC11.18□□□□□ -0.62
Npas1P97459 Gm28678-201ENSMUST00000191593 696 ntBASIC11.18□□□□□ -0.62
Npas1P97459 Gm20910-201ENSMUST00000193268 696 ntBASIC11.18□□□□□ -0.62
Npas1P97459 Gm21871-201ENSMUST00000194621 696 ntBASIC11.18□□□□□ -0.62
Npas1P97459 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Npas1P97459 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Npas1P97459 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Npas1P97459 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Npas1P97459 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC11.18□□□□□ -0.62
Npas1P97459 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Npas1P97459 AC124577.2-201ENSMUST00000217413 2420 ntBASIC11.18□□□□□ -0.62
Npas1P97459 Mab21l3-202ENSMUST00000118411 2700 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Npas1P97459 Map4k1-203ENSMUST00000208227 2720 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Npas1P97459 Riok1-201ENSMUST00000021866 2738 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Npas1P97459 Map4k1-201ENSMUST00000085835 2724 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Npas1P97459 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Npas1P97459 Gtf2ird1-207ENSMUST00000111245 3299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Npas1P97459 Zmym1-202ENSMUST00000106099 2982 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Npas1P97459 Cyb5rl-201ENSMUST00000030364 2360 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Npas1P97459 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Npas1P97459 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Npas1P97459 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Npas1P97459 Sema6d-206ENSMUST00000103239 6225 ntAPPRIS P4 TSL 5 BASIC11.17□□□□□ -0.62
Npas1P97459 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Npas1P97459 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Npas1P97459 Cyp8b1-201ENSMUST00000062474 1950 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Npas1P97459 Ptdss2-201ENSMUST00000026568 3624 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Npas1P97459 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Npas1P97459 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Npas1P97459 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Npas1P97459 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Npas1P97459 Zbtb2-202ENSMUST00000100078 3226 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Npas1P97459 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Npas1P97459 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Npas1P97459 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Npas1P97459 Gm5385-201ENSMUST00000118988 1559 ntBASIC11.17□□□□□ -0.62
Npas1P97459 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Npas1P97459 Chodl-202ENSMUST00000069148 2051 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Npas1P97459 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Npas1P97459 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Npas1P97459 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Npas1P97459 Atp1b2-201ENSMUST00000047889 2842 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Npas1P97459 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Npas1P97459 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC11.17□□□□□ -0.62
Npas1P97459 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Npas1P97459 Gm44608-201ENSMUST00000206827 855 ntBASIC11.17□□□□□ -0.62
Npas1P97459 AC174742.1-201ENSMUST00000218272 304 ntBASIC11.17□□□□□ -0.62
Npas1P97459 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC11.17□□□□□ -0.62
Npas1P97459 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Npas1P97459 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.17□□□□□ -0.62
Npas1P97459 Agpat3-205ENSMUST00000105390 3513 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Npas1P97459 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC11.17□□□□□ -0.62
Npas1P97459 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Npas1P97459 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Npas1P97459 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.17□□□□□ -0.62
Npas1P97459 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Npas1P97459 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Npas1P97459 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Npas1P97459 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Npas1P97459 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Npas1P97459 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC11.17□□□□□ -0.62
Npas1P97459 Ildr1-201ENSMUST00000023617 3042 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Npas1P97459 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC11.16□□□□□ -0.62
Npas1P97459 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 Prkcg-201ENSMUST00000100301 3127 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Npas1P97459 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Npas1P97459 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC11.16□□□□□ -0.62
Npas1P97459 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 Atp2b2-203ENSMUST00000101045 8877 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC11.16□□□□□ -0.62
Npas1P97459 Ush1c-206ENSMUST00000154292 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Npas1P97459 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.16□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms