Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Ggt6-201ENSMUST00000076443 1818 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
PrkdcP97313 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
PrkdcP97313 Znrd1-202ENSMUST00000172518 710 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
PrkdcP97313 Clec4b1-202ENSMUST00000078559 748 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
PrkdcP97313 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
PrkdcP97313 Gm42872-201ENSMUST00000200026 1967 ntBASIC8.81□□□□□ -1
PrkdcP97313 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
PrkdcP97313 Arntl2-203ENSMUST00000111638 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
PrkdcP97313 Hmox2-201ENSMUST00000004172 1730 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PrkdcP97313 Arntl2-201ENSMUST00000080530 1740 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
PrkdcP97313 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC8.8□□□□□ -1
PrkdcP97313 Bpifb6-201ENSMUST00000088955 1669 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PrkdcP97313 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC8.8□□□□□ -1
PrkdcP97313 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
PrkdcP97313 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PrkdcP97313 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC8.8□□□□□ -1
PrkdcP97313 Ighv8-10-201ENSMUST00000199579 358 ntBASIC8.8□□□□□ -1
PrkdcP97313 AI839979-201ENSMUST00000200738 654 ntTSL 2 BASIC8.8□□□□□ -1
PrkdcP97313 Gm44953-201ENSMUST00000208745 1286 ntBASIC8.8□□□□□ -1
PrkdcP97313 Zmiz1os1-202ENSMUST00000225188 1223 ntBASIC8.8□□□□□ -1
PrkdcP97313 Polr2d-201ENSMUST00000025106 956 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PrkdcP97313 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PrkdcP97313 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PrkdcP97313 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC8.8□□□□□ -1
PrkdcP97313 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PrkdcP97313 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PrkdcP97313 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC8.8□□□□□ -1
PrkdcP97313 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC8.8□□□□□ -1
PrkdcP97313 Ms4a15-201ENSMUST00000087923 1713 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PrkdcP97313 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
PrkdcP97313 Krtap4-16-201ENSMUST00000107437 954 ntAPPRIS P1 BASIC8.8□□□□□ -1
PrkdcP97313 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC8.8□□□□□ -1
PrkdcP97313 Atp6v1g2-202ENSMUST00000118384 483 ntTSL 2 BASIC8.8□□□□□ -1
PrkdcP97313 Gm42937-201ENSMUST00000197360 752 ntBASIC8.8□□□□□ -1
PrkdcP97313 Gm43752-201ENSMUST00000198475 697 ntBASIC8.8□□□□□ -1
PrkdcP97313 Gm45594-201ENSMUST00000211717 241 ntBASIC8.8□□□□□ -1
PrkdcP97313 AC167013.1-201ENSMUST00000228592 202 ntBASIC8.8□□□□□ -1
PrkdcP97313 Gm4744-201ENSMUST00000073642 792 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
PrkdcP97313 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC8.8□□□□□ -1
PrkdcP97313 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC8.8□□□□□ -1
PrkdcP97313 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PrkdcP97313 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC8.8□□□□□ -1
PrkdcP97313 Tmem62-202ENSMUST00000110686 2417 ntTSL 1 (best) BASIC8.8□□□□□ -1
PrkdcP97313 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC8.8□□□□□ -1
PrkdcP97313 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PrkdcP97313 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC8.8□□□□□ -1
PrkdcP97313 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
PrkdcP97313 Rtn2-202ENSMUST00000108468 1076 ntAPPRIS ALT2 TSL 1 (best) BASIC8.8□□□□□ -1
PrkdcP97313 Gm12314-201ENSMUST00000118104 538 ntBASIC8.8□□□□□ -1
PrkdcP97313 Gm12291-201ENSMUST00000121627 311 ntBASIC8.8□□□□□ -1
PrkdcP97313 Gm8494-201ENSMUST00000178171 1233 ntBASIC8.8□□□□□ -1
PrkdcP97313 Nkg7-203ENSMUST00000206741 686 ntTSL 1 (best) BASIC8.8□□□□□ -1
PrkdcP97313 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC8.8□□□□□ -1
PrkdcP97313 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC8.8□□□□□ -1
PrkdcP97313 Krtap4-9-201ENSMUST00000105059 1059 ntAPPRIS P1 BASIC8.79□□□□□ -1
PrkdcP97313 Chn2-212ENSMUST00000204115 783 ntTSL 5 BASIC8.79□□□□□ -1
PrkdcP97313 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PrkdcP97313 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC8.79□□□□□ -1
PrkdcP97313 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PrkdcP97313 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PrkdcP97313 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PrkdcP97313 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC8.79□□□□□ -1
PrkdcP97313 2610301B20Rik-202ENSMUST00000101504 2053 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
PrkdcP97313 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PrkdcP97313 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
PrkdcP97313 Gm12857-201ENSMUST00000117678 592 ntBASIC8.79□□□□□ -1
PrkdcP97313 Mir6407-201ENSMUST00000184510 101 ntBASIC8.79□□□□□ -1
PrkdcP97313 Zfp655-203ENSMUST00000196069 1150 ntTSL 1 (best) BASIC8.79□□□□□ -1
PrkdcP97313 Gm17831-201ENSMUST00000205579 900 ntBASIC8.79□□□□□ -1
PrkdcP97313 Gm4157-201ENSMUST00000211647 679 ntBASIC8.79□□□□□ -1
PrkdcP97313 AC165260.2-203ENSMUST00000224237 336 ntBASIC8.79□□□□□ -1
PrkdcP97313 Gm5455-201ENSMUST00000058710 715 ntBASIC8.79□□□□□ -1
PrkdcP97313 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
PrkdcP97313 Ypel4-201ENSMUST00000090729 1676 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PrkdcP97313 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PrkdcP97313 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
PrkdcP97313 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC8.79□□□□□ -1
PrkdcP97313 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
PrkdcP97313 Slc6a21-201ENSMUST00000085364 1732 ntTSL 1 (best) BASIC8.79□□□□□ -1
PrkdcP97313 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC8.79□□□□□ -1
PrkdcP97313 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC8.79□□□□□ -1
PrkdcP97313 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PrkdcP97313 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC8.79□□□□□ -1
PrkdcP97313 Gm26013-201ENSMUST00000104404 119 ntBASIC8.79□□□□□ -1
PrkdcP97313 Agbl3-201ENSMUST00000115009 806 ntTSL 5 BASIC8.79□□□□□ -1
PrkdcP97313 Gm12196-201ENSMUST00000120954 262 ntBASIC8.79□□□□□ -1
PrkdcP97313 Cd63-ps-202ENSMUST00000154992 717 ntBASIC8.79□□□□□ -1
PrkdcP97313 Gm20662-201ENSMUST00000176356 601 ntAPPRIS P5 TSL 3 BASIC8.79□□□□□ -1
PrkdcP97313 Gm9230-201ENSMUST00000188228 532 ntBASIC8.79□□□□□ -1
PrkdcP97313 Rpl7a-ps2-201ENSMUST00000200554 774 ntBASIC8.79□□□□□ -1
PrkdcP97313 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC8.79□□□□□ -1
PrkdcP97313 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC8.79□□□□□ -1
PrkdcP97313 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PrkdcP97313 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC8.79□□□□□ -1
PrkdcP97313 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC8.79□□□□□ -1
PrkdcP97313 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC8.79□□□□□ -1
PrkdcP97313 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PrkdcP97313 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC8.79□□□□□ -1
PrkdcP97313 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC8.79□□□□□ -1
PrkdcP97313 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC8.79□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms