Protein–RNA interactions for Protein: P84444

Ccl21a, C-C motif chemokine 21a, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl21aP84444 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC11.02□□□□□ -0.65
Ccl21aP84444 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl21aP84444 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC11.02□□□□□ -0.65
Ccl21aP84444 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl21aP84444 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl21aP84444 Gm14371-201ENSMUST00000138925 1518 ntBASIC11.02□□□□□ -0.65
Ccl21aP84444 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.02□□□□□ -0.65
Ccl21aP84444 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl21aP84444 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC11.02□□□□□ -0.65
Ccl21aP84444 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl21aP84444 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl21aP84444 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl21aP84444 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl21aP84444 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.02□□□□□ -0.65
Ccl21aP84444 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC11.02□□□□□ -0.65
Ccl21aP84444 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl21aP84444 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.65
Ccl21aP84444 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC11.01□□□□□ -0.65
Ccl21aP84444 Gm38157-201ENSMUST00000194178 1698 ntBASIC11.01□□□□□ -0.65
Ccl21aP84444 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC11.01□□□□□ -0.65
Ccl21aP84444 Gm44775-201ENSMUST00000207266 1456 ntBASIC11.01□□□□□ -0.65
Ccl21aP84444 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Ccl21aP84444 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC11.01□□□□□ -0.65
Ccl21aP84444 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Gm13996-201ENSMUST00000118456 430 ntBASIC11.01□□□□□ -0.65
Ccl21aP84444 Gm8566-201ENSMUST00000120174 465 ntBASIC11.01□□□□□ -0.65
Ccl21aP84444 Anp32a-205ENSMUST00000135395 924 ntAPPRIS ALT2 TSL 5 BASIC11.01□□□□□ -0.65
Ccl21aP84444 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Gm18393-201ENSMUST00000208349 1131 ntBASIC11.01□□□□□ -0.65
Ccl21aP84444 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Ndufb4-201ENSMUST00000023514 971 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Ccdc70-202ENSMUST00000070649 961 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC11.01□□□□□ -0.65
Ccl21aP84444 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC11.01□□□□□ -0.65
Ccl21aP84444 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC11.01□□□□□ -0.65
Ccl21aP84444 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC11.01□□□□□ -0.65
Ccl21aP84444 Gm43081-201ENSMUST00000199082 1380 ntBASIC11.01□□□□□ -0.65
Ccl21aP84444 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.01□□□□□ -0.65
Ccl21aP84444 Gm38577-201ENSMUST00000221531 4545 ntBASIC11.01□□□□□ -0.65
Ccl21aP84444 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Stpg3-201ENSMUST00000043774 1430 ntAPPRIS P2 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.01□□□□□ -0.65
Ccl21aP84444 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl21aP84444 Tmub1-203ENSMUST00000115036 1455 ntTSL 5 BASIC11□□□□□ -0.65
Ccl21aP84444 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl21aP84444 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl21aP84444 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl21aP84444 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl21aP84444 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl21aP84444 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccl21aP84444 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl21aP84444 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl21aP84444 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccl21aP84444 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC11□□□□□ -0.65
Ccl21aP84444 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Ccl21aP84444 Gm37737-201ENSMUST00000195013 1638 ntBASIC11□□□□□ -0.65
Ccl21aP84444 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC11□□□□□ -0.65
Ccl21aP84444 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC11□□□□□ -0.65
Ccl21aP84444 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC11□□□□□ -0.65
Ccl21aP84444 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC11□□□□□ -0.65
Ccl21aP84444 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccl21aP84444 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC11□□□□□ -0.65
Ccl21aP84444 Gm31224-201ENSMUST00000212682 513 ntTSL 3 BASIC11□□□□□ -0.65
Ccl21aP84444 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl21aP84444 Calml4-207ENSMUST00000215968 526 ntTSL 2 BASIC11□□□□□ -0.65
Ccl21aP84444 AC140293.1-201ENSMUST00000225626 1247 ntBASIC11□□□□□ -0.65
Ccl21aP84444 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl21aP84444 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC11□□□□□ -0.65
Ccl21aP84444 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccl21aP84444 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl21aP84444 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC11□□□□□ -0.65
Ccl21aP84444 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11□□□□□ -0.65
Ccl21aP84444 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC11□□□□□ -0.65
Ccl21aP84444 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC11□□□□□ -0.65
Retrieved 100 of 76,532 protein–RNA pairs in 66 ms