Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H3f3aP84244 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H3f3aP84244 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
H3f3aP84244 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H3f3aP84244 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
H3f3aP84244 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H3f3aP84244 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H3f3aP84244 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
H3f3aP84244 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H3f3aP84244 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
H3f3aP84244 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H3f3aP84244 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H3f3aP84244 AC164107.1-201ENSMUST00000227730 2161 ntBASIC11.87□□□□□ -0.51
H3f3aP84244 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H3f3aP84244 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
H3f3aP84244 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H3f3aP84244 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H3f3aP84244 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC11.87□□□□□ -0.51
H3f3aP84244 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H3f3aP84244 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.87□□□□□ -0.51
H3f3aP84244 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
H3f3aP84244 Pmepa1os-201ENSMUST00000150185 680 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H3f3aP84244 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.87□□□□□ -0.51
H3f3aP84244 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H3f3aP84244 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC11.87□□□□□ -0.51
H3f3aP84244 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
H3f3aP84244 Gm18473-201ENSMUST00000220543 868 ntBASIC11.87□□□□□ -0.51
H3f3aP84244 Itm2b-204ENSMUST00000228637 783 ntBASIC11.87□□□□□ -0.51
H3f3aP84244 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H3f3aP84244 Rps15-201ENSMUST00000062674 572 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H3f3aP84244 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H3f3aP84244 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
H3f3aP84244 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H3f3aP84244 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H3f3aP84244 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H3f3aP84244 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H3f3aP84244 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
H3f3aP84244 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
H3f3aP84244 Sass6-206ENSMUST00000198386 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC11.87□□□□□ -0.51
H3f3aP84244 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
H3f3aP84244 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
H3f3aP84244 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
H3f3aP84244 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.86□□□□□ -0.51
H3f3aP84244 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H3f3aP84244 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H3f3aP84244 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H3f3aP84244 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.86□□□□□ -0.51
H3f3aP84244 AL645783.1-201ENSMUST00000221416 1832 ntBASIC11.86□□□□□ -0.51
H3f3aP84244 Gm43364-201ENSMUST00000196046 3274 ntBASIC11.86□□□□□ -0.51
H3f3aP84244 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H3f3aP84244 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H3f3aP84244 Rad54b-202ENSMUST00000095145 2403 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H3f3aP84244 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H3f3aP84244 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H3f3aP84244 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H3f3aP84244 Vhl-ps1-201ENSMUST00000174813 597 ntBASIC11.86□□□□□ -0.51
H3f3aP84244 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.86□□□□□ -0.51
H3f3aP84244 Gm7287-201ENSMUST00000205267 602 ntBASIC11.86□□□□□ -0.51
H3f3aP84244 Gm45841-201ENSMUST00000207700 164 ntBASIC11.86□□□□□ -0.51
H3f3aP84244 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.86□□□□□ -0.51
H3f3aP84244 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.86□□□□□ -0.51
H3f3aP84244 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.86□□□□□ -0.51
H3f3aP84244 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H3f3aP84244 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H3f3aP84244 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.86□□□□□ -0.51
H3f3aP84244 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H3f3aP84244 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H3f3aP84244 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.86□□□□□ -0.51
H3f3aP84244 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H3f3aP84244 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H3f3aP84244 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
H3f3aP84244 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.86□□□□□ -0.51
H3f3aP84244 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.86□□□□□ -0.51
H3f3aP84244 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H3f3aP84244 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H3f3aP84244 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.86□□□□□ -0.51
H3f3aP84244 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H3f3aP84244 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H3f3aP84244 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H3f3aP84244 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.86□□□□□ -0.51
H3f3aP84244 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC11.86□□□□□ -0.51
H3f3aP84244 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC11.85□□□□□ -0.51
H3f3aP84244 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H3f3aP84244 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC11.85□□□□□ -0.51
H3f3aP84244 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H3f3aP84244 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
H3f3aP84244 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H3f3aP84244 Pde9a-203ENSMUST00000127929 1891 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
H3f3aP84244 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.85□□□□□ -0.51
H3f3aP84244 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H3f3aP84244 Calr3-201ENSMUST00000019876 1769 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H3f3aP84244 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.85□□□□□ -0.51
H3f3aP84244 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H3f3aP84244 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC11.85□□□□□ -0.51
H3f3aP84244 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H3f3aP84244 Ermard-203ENSMUST00000097393 2535 ntAPPRIS P3 TSL 1 (best) BASIC11.85□□□□□ -0.51
H3f3aP84244 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
H3f3aP84244 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC11.85□□□□□ -0.51
H3f3aP84244 Gm12960-201ENSMUST00000120017 1066 ntBASIC11.85□□□□□ -0.51
H3f3aP84244 Gm9002-201ENSMUST00000178437 499 ntBASIC11.85□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms