Protein–RNA interactions for Protein: P84228

Hist1h3b, Histone H3.2, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3bP84228 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h3bP84228 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h3bP84228 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h3bP84228 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h3bP84228 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC11.74□□□□□ -0.53
Hist1h3bP84228 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.74□□□□□ -0.53
Hist1h3bP84228 Gm14057-201ENSMUST00000120631 482 ntBASIC11.74□□□□□ -0.53
Hist1h3bP84228 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC11.74□□□□□ -0.53
Hist1h3bP84228 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h3bP84228 Gm38144-201ENSMUST00000192790 465 ntBASIC11.74□□□□□ -0.53
Hist1h3bP84228 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC11.74□□□□□ -0.53
Hist1h3bP84228 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC11.74□□□□□ -0.53
Hist1h3bP84228 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.74□□□□□ -0.53
Hist1h3bP84228 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Hist1h3bP84228 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h3bP84228 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC11.74□□□□□ -0.53
Hist1h3bP84228 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h3bP84228 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC11.74□□□□□ -0.53
Hist1h3bP84228 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Hist1h3bP84228 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC11.74□□□□□ -0.53
Hist1h3bP84228 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC11.74□□□□□ -0.53
Hist1h3bP84228 Gm38355-201ENSMUST00000192514 1570 ntBASIC11.74□□□□□ -0.53
Hist1h3bP84228 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.74□□□□□ -0.53
Hist1h3bP84228 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h3bP84228 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h3bP84228 Creb3-201ENSMUST00000102944 1884 ntAPPRIS P2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h3bP84228 Gm7899-201ENSMUST00000192935 1897 ntBASIC11.74□□□□□ -0.53
Hist1h3bP84228 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h3bP84228 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h3bP84228 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h3bP84228 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC11.74□□□□□ -0.53
Hist1h3bP84228 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h3bP84228 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC11.74□□□□□ -0.53
Hist1h3bP84228 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC11.74□□□□□ -0.53
Hist1h3bP84228 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h3bP84228 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Hist1h3bP84228 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hist1h3bP84228 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hist1h3bP84228 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hist1h3bP84228 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hist1h3bP84228 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hist1h3bP84228 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hist1h3bP84228 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Hist1h3bP84228 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hist1h3bP84228 Prss54-202ENSMUST00000180075 1152 ntAPPRIS P3 TSL 5 BASIC11.73□□□□□ -0.53
Hist1h3bP84228 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC11.73□□□□□ -0.53
Hist1h3bP84228 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Hist1h3bP84228 Gm43677-201ENSMUST00000198098 2378 ntBASIC11.73□□□□□ -0.53
Hist1h3bP84228 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.73□□□□□ -0.53
Hist1h3bP84228 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Hist1h3bP84228 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hist1h3bP84228 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC11.73□□□□□ -0.53
Hist1h3bP84228 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC11.73□□□□□ -0.53
Hist1h3bP84228 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hist1h3bP84228 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hist1h3bP84228 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hist1h3bP84228 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hist1h3bP84228 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hist1h3bP84228 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hist1h3bP84228 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hist1h3bP84228 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hist1h3bP84228 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC11.73□□□□□ -0.53
Hist1h3bP84228 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hist1h3bP84228 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Hist1h3bP84228 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC11.73□□□□□ -0.53
Hist1h3bP84228 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hist1h3bP84228 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC11.73□□□□□ -0.53
Hist1h3bP84228 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hist1h3bP84228 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC11.73□□□□□ -0.53
Hist1h3bP84228 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Hist1h3bP84228 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC11.72□□□□□ -0.53
Hist1h3bP84228 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hist1h3bP84228 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hist1h3bP84228 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC11.72□□□□□ -0.53
Hist1h3bP84228 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hist1h3bP84228 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.72□□□□□ -0.53
Hist1h3bP84228 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hist1h3bP84228 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hist1h3bP84228 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hist1h3bP84228 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hist1h3bP84228 Gm43134-201ENSMUST00000199434 1886 ntBASIC11.72□□□□□ -0.53
Hist1h3bP84228 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hist1h3bP84228 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
Hist1h3bP84228 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Hist1h3bP84228 Xylb-201ENSMUST00000039610 3383 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hist1h3bP84228 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hist1h3bP84228 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC11.72□□□□□ -0.53
Hist1h3bP84228 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hist1h3bP84228 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC11.72□□□□□ -0.53
Hist1h3bP84228 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Hist1h3bP84228 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hist1h3bP84228 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hist1h3bP84228 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.72□□□□□ -0.53
Hist1h3bP84228 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Hist1h3bP84228 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hist1h3bP84228 Gm21038-201ENSMUST00000222205 1383 ntBASIC11.72□□□□□ -0.53
Hist1h3bP84228 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
Hist1h3bP84228 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Hist1h3bP84228 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Hist1h3bP84228 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC11.72□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms