Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CiitaP79621 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CiitaP79621 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CiitaP79621 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CiitaP79621 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CiitaP79621 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CiitaP79621 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CiitaP79621 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CiitaP79621 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CiitaP79621 Gm8805-201ENSMUST00000117848 313 ntBASIC14.41□□□□□ -0.1
CiitaP79621 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC14.41□□□□□ -0.1
CiitaP79621 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CiitaP79621 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CiitaP79621 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CiitaP79621 Gm44985-201ENSMUST00000206202 1016 ntBASIC14.41□□□□□ -0.1
CiitaP79621 Mymx-204ENSMUST00000208801 437 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
CiitaP79621 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CiitaP79621 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CiitaP79621 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CiitaP79621 Gm8706-201ENSMUST00000197372 1491 ntBASIC14.41□□□□□ -0.1
CiitaP79621 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CiitaP79621 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CiitaP79621 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CiitaP79621 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CiitaP79621 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC14.41□□□□□ -0.1
CiitaP79621 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CiitaP79621 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
CiitaP79621 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
CiitaP79621 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CiitaP79621 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
CiitaP79621 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
CiitaP79621 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.41□□□□□ -0.1
CiitaP79621 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CiitaP79621 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
CiitaP79621 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
CiitaP79621 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.41□□□□□ -0.1
CiitaP79621 Gm5620-201ENSMUST00000077991 1348 ntBASIC14.41□□□□□ -0.1
CiitaP79621 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CiitaP79621 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CiitaP79621 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CiitaP79621 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
CiitaP79621 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC14.4□□□□□ -0.1
CiitaP79621 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CiitaP79621 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CiitaP79621 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CiitaP79621 Ddo-203ENSMUST00000213503 1759 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CiitaP79621 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CiitaP79621 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
CiitaP79621 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
CiitaP79621 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CiitaP79621 Gm2231-201ENSMUST00000125661 612 ntBASIC14.4□□□□□ -0.1
CiitaP79621 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.4□□□□□ -0.1
CiitaP79621 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
CiitaP79621 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC14.4□□□□□ -0.1
CiitaP79621 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC14.4□□□□□ -0.1
CiitaP79621 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CiitaP79621 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CiitaP79621 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
CiitaP79621 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CiitaP79621 Gm10268-201ENSMUST00000085340 555 ntBASIC14.4□□□□□ -0.1
CiitaP79621 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CiitaP79621 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CiitaP79621 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CiitaP79621 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CiitaP79621 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
CiitaP79621 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CiitaP79621 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
CiitaP79621 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
CiitaP79621 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CiitaP79621 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CiitaP79621 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
CiitaP79621 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CiitaP79621 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CiitaP79621 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CiitaP79621 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
CiitaP79621 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CiitaP79621 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CiitaP79621 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
CiitaP79621 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CiitaP79621 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CiitaP79621 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC14.39□□□□□ -0.11
CiitaP79621 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CiitaP79621 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC14.39□□□□□ -0.11
CiitaP79621 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
CiitaP79621 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
CiitaP79621 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CiitaP79621 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CiitaP79621 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CiitaP79621 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CiitaP79621 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
CiitaP79621 Gm11637-201ENSMUST00000120601 592 ntBASIC14.39□□□□□ -0.11
CiitaP79621 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CiitaP79621 Mir7221-201ENSMUST00000184009 72 ntBASIC14.39□□□□□ -0.11
CiitaP79621 Gm28693-202ENSMUST00000190758 331 ntBASIC14.39□□□□□ -0.11
CiitaP79621 AC135669.1-202ENSMUST00000216742 540 ntBASIC14.39□□□□□ -0.11
CiitaP79621 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.39□□□□□ -0.11
CiitaP79621 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CiitaP79621 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
CiitaP79621 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
CiitaP79621 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 60.4 ms