Protein–RNA interactions for Protein: P70278

Stra8, Stimulated by retinoic acid gene 8 protein, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra8P70278 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Stra8P70278 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Stra8P70278 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Stra8P70278 Ppfia4-205ENSMUST00000189361 5238 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Stra8P70278 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC18.42■□□□□ 0.54
Stra8P70278 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Stra8P70278 Gm15460-201ENSMUST00000118147 391 ntBASIC18.42■□□□□ 0.54
Stra8P70278 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC18.42■□□□□ 0.54
Stra8P70278 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC18.42■□□□□ 0.54
Stra8P70278 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC18.42■□□□□ 0.54
Stra8P70278 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Stra8P70278 Gm43703-201ENSMUST00000200523 763 ntBASIC18.42■□□□□ 0.54
Stra8P70278 Gm18934-201ENSMUST00000216671 1044 ntBASIC18.42■□□□□ 0.54
Stra8P70278 Gm7775-201ENSMUST00000218871 853 ntBASIC18.42■□□□□ 0.54
Stra8P70278 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC18.42■□□□□ 0.54
Stra8P70278 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Stra8P70278 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Stra8P70278 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Stra8P70278 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Stra8P70278 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Stra8P70278 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
Stra8P70278 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Stra8P70278 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Stra8P70278 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
Stra8P70278 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Stra8P70278 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Stra8P70278 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Stra8P70278 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Stra8P70278 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Stra8P70278 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
Stra8P70278 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
Stra8P70278 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Stra8P70278 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Stra8P70278 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Stra8P70278 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Stra8P70278 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Stra8P70278 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC18.41■□□□□ 0.54
Stra8P70278 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Stra8P70278 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Stra8P70278 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Stra8P70278 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Stra8P70278 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Stra8P70278 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Stra8P70278 Mast3-203ENSMUST00000211948 4251 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Stra8P70278 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Stra8P70278 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Stra8P70278 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Stra8P70278 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC18.41■□□□□ 0.54
Stra8P70278 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Stra8P70278 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Stra8P70278 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Stra8P70278 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Stra8P70278 Uggt2-212ENSMUST00000156203 6456 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Stra8P70278 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Stra8P70278 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Stra8P70278 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Stra8P70278 4930432E11Rik-202ENSMUST00000063585 10871 ntBASIC18.4■□□□□ 0.54
Stra8P70278 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC18.4■□□□□ 0.54
Stra8P70278 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
Stra8P70278 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC18.4■□□□□ 0.54
Stra8P70278 Gm10576-201ENSMUST00000191927 825 ntBASIC18.4■□□□□ 0.54
Stra8P70278 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Stra8P70278 AC156016.3-201ENSMUST00000228623 344 ntBASIC18.4■□□□□ 0.54
Stra8P70278 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Stra8P70278 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Stra8P70278 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Stra8P70278 Pcdh10-203ENSMUST00000171554 7273 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Stra8P70278 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC18.4■□□□□ 0.54
Stra8P70278 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Stra8P70278 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Stra8P70278 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Stra8P70278 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Stra8P70278 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Stra8P70278 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Stra8P70278 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC18.4■□□□□ 0.54
Stra8P70278 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Stra8P70278 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Stra8P70278 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Stra8P70278 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Stra8P70278 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Stra8P70278 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Stra8P70278 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Stra8P70278 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Stra8P70278 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Stra8P70278 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Stra8P70278 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
Stra8P70278 Gm27306-201ENSMUST00000183970 107 ntBASIC18.39■□□□□ 0.53
Stra8P70278 Gm27321-201ENSMUST00000185021 205 ntBASIC18.39■□□□□ 0.53
Stra8P70278 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC18.39■□□□□ 0.53
Stra8P70278 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Stra8P70278 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Stra8P70278 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Stra8P70278 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC18.39■□□□□ 0.53
Stra8P70278 Zfp354c-202ENSMUST00000109135 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Stra8P70278 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Stra8P70278 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Stra8P70278 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Stra8P70278 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Stra8P70278 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Stra8P70278 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms