Protein–RNA interactions for Protein: P68404

Prkcb, Protein kinase C beta type, mousemouse

Predictions only

Length 671 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkcbP68404 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PrkcbP68404 Bcat1-202ENSMUST00000048252 1642 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PrkcbP68404 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC14.4□□□□□ -0.1
PrkcbP68404 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PrkcbP68404 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
PrkcbP68404 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
PrkcbP68404 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PrkcbP68404 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
PrkcbP68404 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PrkcbP68404 Cops5-201ENSMUST00000027050 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PrkcbP68404 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PrkcbP68404 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.39□□□□□ -0.11
PrkcbP68404 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC14.39□□□□□ -0.11
PrkcbP68404 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PrkcbP68404 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PrkcbP68404 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PrkcbP68404 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PrkcbP68404 Gm13123-201ENSMUST00000122173 492 ntBASIC14.39□□□□□ -0.11
PrkcbP68404 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PrkcbP68404 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PrkcbP68404 AY702102-202ENSMUST00000194651 1173 ntBASIC14.39□□□□□ -0.11
PrkcbP68404 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC14.39□□□□□ -0.11
PrkcbP68404 Gm37497-201ENSMUST00000195830 798 ntBASIC14.39□□□□□ -0.11
PrkcbP68404 3830422I06Rik-201ENSMUST00000200199 1181 ntBASIC14.39□□□□□ -0.11
PrkcbP68404 Rpsa-ps10-201ENSMUST00000057740 885 ntBASIC14.39□□□□□ -0.11
PrkcbP68404 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PrkcbP68404 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PrkcbP68404 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PrkcbP68404 Acot6-202ENSMUST00000222921 3622 ntBASIC14.39□□□□□ -0.11
PrkcbP68404 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PrkcbP68404 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC14.39□□□□□ -0.11
PrkcbP68404 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.39□□□□□ -0.11
PrkcbP68404 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PrkcbP68404 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PrkcbP68404 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC14.39□□□□□ -0.11
PrkcbP68404 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PrkcbP68404 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PrkcbP68404 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PrkcbP68404 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PrkcbP68404 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.39□□□□□ -0.11
PrkcbP68404 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PrkcbP68404 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PrkcbP68404 Gm11405-201ENSMUST00000118689 1556 ntBASIC14.39□□□□□ -0.11
PrkcbP68404 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.39□□□□□ -0.11
PrkcbP68404 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PrkcbP68404 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PrkcbP68404 Gm2420-202ENSMUST00000202224 2249 ntBASIC14.38□□□□□ -0.11
PrkcbP68404 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PrkcbP68404 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PrkcbP68404 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PrkcbP68404 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PrkcbP68404 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PrkcbP68404 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PrkcbP68404 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PrkcbP68404 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PrkcbP68404 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PrkcbP68404 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
PrkcbP68404 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC14.38□□□□□ -0.11
PrkcbP68404 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
PrkcbP68404 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC14.38□□□□□ -0.11
PrkcbP68404 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.38□□□□□ -0.11
PrkcbP68404 Rpl36-201ENSMUST00000080492 404 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PrkcbP68404 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PrkcbP68404 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PrkcbP68404 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PrkcbP68404 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
PrkcbP68404 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.38□□□□□ -0.11
PrkcbP68404 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PrkcbP68404 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PrkcbP68404 H2-DMb2-201ENSMUST00000041982 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PrkcbP68404 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PrkcbP68404 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PrkcbP68404 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
PrkcbP68404 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PrkcbP68404 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PrkcbP68404 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PrkcbP68404 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PrkcbP68404 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PrkcbP68404 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PrkcbP68404 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PrkcbP68404 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PrkcbP68404 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.37□□□□□ -0.11
PrkcbP68404 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PrkcbP68404 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PrkcbP68404 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PrkcbP68404 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.37□□□□□ -0.11
PrkcbP68404 Gm6161-201ENSMUST00000121942 1102 ntBASIC14.37□□□□□ -0.11
PrkcbP68404 Drap1-209ENSMUST00000136579 734 ntTSL 2 BASIC14.37□□□□□ -0.11
PrkcbP68404 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PrkcbP68404 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PrkcbP68404 Gm6254-201ENSMUST00000168178 1072 ntBASIC14.37□□□□□ -0.11
PrkcbP68404 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PrkcbP68404 Gm6153-201ENSMUST00000172004 1058 ntBASIC14.37□□□□□ -0.11
PrkcbP68404 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PrkcbP68404 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
PrkcbP68404 Gm5641-202ENSMUST00000198699 1080 ntBASIC14.37□□□□□ -0.11
PrkcbP68404 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
PrkcbP68404 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC14.37□□□□□ -0.11
PrkcbP68404 Gm45841-201ENSMUST00000207700 164 ntBASIC14.37□□□□□ -0.11
PrkcbP68404 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC14.37□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 52 ms